RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 KLF5Q13887 457 aaPredicted RBP10.17□□□□□ -0.78
DDR1-225ENST00000376568 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
DDR1-225ENST00000376568 ORMDL3Q8N138 153 aa10.17□□□□□ -0.78
DDR1-225ENST00000376568 PLP1P60201 277 aa10.17□□□□□ -0.78
DDR1-225ENST00000376568 NDUFA11Q86Y39 141 aa10.17□□□□□ -0.78
DDR1-225ENST00000376568 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
DDR1-225ENST00000376568 A0A0U1RRA0 63 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 TRGV11A0A075B6L2 103 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 SAMD13Q5VXD3 122 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 CLPSL2Q6UWE3 100 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 ADAMTSL5Q6ZMM2 481 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 MYOZ3Q8TDC0 251 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 RETNQ9HD89 108 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 TOMM7Q9P0U1 55 aa10.16□□□□□ -0.78
DDR1-225ENST00000376568 PROK1P58294 105 aa10.15□□□□□ -0.78
DDR1-225ENST00000376568 COLCA2A8K830 154 aa10.15□□□□□ -0.78
DDR1-225ENST00000376568 V9GYV3 84 aa10.15□□□□□ -0.78
DDR1-225ENST00000376568 SMIM6P0DI80 62 aa10.15□□□□□ -0.79
DDR1-225ENST00000376568 C11orf68Q9H3H3 251 aaKnown RBP10.14□□□□□ -0.79
DDR1-225ENST00000376568 K7EMT4 169 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 SLAQ13239 276 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 ZNRF2Q8NHG8 242 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 LOC102724200A0A096LPH7 203 aaPredicted RBP10.14□□□□□ -0.79
DDR1-225ENST00000376568 A0A0J9YX75 114 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 K7EQG2 157 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 NMUP48645 174 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
DDR1-225ENST00000376568 SHISA2Q6UWI4 295 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 MT-ND6P03923 174 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 KRTAP1-1Q07627 177 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 CR1P17927 2039 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 KLF12Q9Y4X4 402 aa10.13□□□□□ -0.79
DDR1-225ENST00000376568 TSTD3H0UI37 97 aa10.12□□□□□ -0.79
DDR1-225ENST00000376568 G3V4G9 280 aa10.12□□□□□ -0.79
DDR1-225ENST00000376568 LTAP01374 205 aa10.12□□□□□ -0.79
DDR1-225ENST00000376568 F2Z2F3 143 aa10.12□□□□□ -0.79
DDR1-225ENST00000376568 IFI27P40305 119 aaPredicted RBP10.11□□□□□ -0.79
DDR1-225ENST00000376568 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 ST20Q9HBF5 79 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 P0DMU3 169 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 H3BMM0 161 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 PRR9Q5T870 116 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
DDR1-225ENST00000376568 A0A087WX48 190 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 APOC4P55056 127 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 NIT1Q86X76 327 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 MAP1LC3CQ9BXW4 147 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 LYPD6BQ8NI32 183 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 GTSF1Q8WW33 167 aa10.1□□□□□ -0.79
DDR1-225ENST00000376568 RPL39LQ96EH5 51 aaKnown RBP10.1□□□□□ -0.79
DDR1-225ENST00000376568 UBE2DNLQ8IWF7 75 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 BSNQ9UPA5 3926 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 A0A087WWC5 75 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 TRAV13-1A0A0B4J241 112 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
DDR1-225ENST00000376568 BRI3O95415 125 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
DDR1-225ENST00000376568 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 Q6ZTI0 123 aa10.09□□□□□ -0.79
DDR1-225ENST00000376568 ZNF324O75467 553 aaPredicted RBP10.09□□□□□ -0.79
DDR1-225ENST00000376568 TYMSP04818 313 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 TMEM89A2RUT3 159 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
DDR1-225ENST00000376568 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
DDR1-225ENST00000376568 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
DDR1-225ENST00000376568 COX19Q49B96 90 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 CRIP1P50238 77 aa10.08□□□□□ -0.8
DDR1-225ENST00000376568 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
DDR1-225ENST00000376568 H7C1H1 209 aa10.07□□□□□ -0.8
DDR1-225ENST00000376568 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
DDR1-225ENST00000376568 ZMAT4Q9H898 229 aa10.07□□□□□ -0.8
DDR1-225ENST00000376568 RPL36AP83881 106 aaKnown RBP10.07□□□□□ -0.8
DDR1-225ENST00000376568 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
DDR1-225ENST00000376568 RPL36ALQ969Q0 106 aaKnown RBP10.07□□□□□ -0.8
DDR1-225ENST00000376568 A8MWP6 167 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms