RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 NPBQ8NG41 125 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TRAV2A0A0B4J234 112 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 CIDEAO60543 219 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 LINC01549A6NIU2 74 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 UBE2E1P51965 193 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 LY6LH3BQJ8 138 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 LGALS3P17931 250 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 FGF6P10767 208 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 CCL19Q99731 98 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 H7C1H1 209 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 DGAT2L7PQ6IED9 249 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ID1P41134 155 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 RPL39P62891 51 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
TNFRSF1B-201ENST00000376259 IGKV3OR2-268A0A0C4DH90 116 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 CEND1Q8N111 149 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TRBV7-1A0A0A6YYK4 115 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 A0A1W2PPR1 153 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 PIMREGQ9BSJ6 248 aa11.03□□□□□ -0.64
TNFRSF1B-201ENST00000376259 IGLC6P0CF74 106 aa11.02□□□□□ -0.64
TNFRSF1B-201ENST00000376259 C12orf74Q32Q52 190 aa11.02□□□□□ -0.64
TNFRSF1B-201ENST00000376259 TMEM238LA0A1B0GVL6 79 aa11.02□□□□□ -0.65
TNFRSF1B-201ENST00000376259 A6NJY4 79 aa11.02□□□□□ -0.65
TNFRSF1B-201ENST00000376259 DCHS2Q6V1P9 2916 aa11.02□□□□□ -0.65
TNFRSF1B-201ENST00000376259 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
TNFRSF1B-201ENST00000376259 F8VRH5 84 aa11.01□□□□□ -0.65
TNFRSF1B-201ENST00000376259 PRR9Q5T870 116 aa11.01□□□□□ -0.65
TNFRSF1B-201ENST00000376259 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV4-39P01824 125 aa11.01□□□□□ -0.65
TNFRSF1B-201ENST00000376259 DUX3Q96PT4 197 aa11.01□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 OOSP1A8MZH6 123 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 UCNP55089 124 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ZNF876PQ49A33 203 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 C1orf122Q6ZSJ8 110 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 PLNP26678 52 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 LY6G5BQ8NDX9 201 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 C20orf173Q96LM9 149 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SIGMAR1Q99720 223 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SMPXQ9UHP9 88 aa11□□□□□ -0.65
TNFRSF1B-201ENST00000376259 A0A087WX48 190 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 PTH2Q96A98 100 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SPXQ9BT56 116 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SDHAF1A6NFY7 115 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 EDN2P20800 178 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 A0A1W2PRX2 142 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SNRPD3P62318 126 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 Q6ZS46 218 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 CUBNO60494 3623 aa10.99□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ODF3BA8MYP8 253 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 OVOL1O14753 267 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 AZU1P20160 251 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGF2-ASQ6U949 168 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 PHLDA1Q8WV24 401 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 MYMXA0A1B0GTQ4 84 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGLL5B9A064 214 aa10.98□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV3-16A0A0C4DH30 117 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 C10orf99Q6UWK7 81 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ANKRD17O75179 2603 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 C19orf84I3L1E1 186 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 ZFAND3Q9H8U3 227 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV1-69DA0A0B4J2H0 117 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV1-69P01742 117 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 SIRPDQ9H106 197 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 VCX2Q9H322 139 aa10.97□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHV3-38A0A0C4DH36 116 aa10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 IGHG4P01861 327 aa10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 DEFB136Q30KP8 78 aa10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 C5orf56Q8N8D9 126 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms