RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 PSG8Q9UQ74 426 aa15.45■□□□□ 0.06
C9orf47-202ENST00000375850 IGHV3-73A0A0B4J1V6 119 aa15.44■□□□□ 0.06
C9orf47-202ENST00000375850 ZNF80P51504 273 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-202ENST00000375850 HAMPP81172 84 aa15.44■□□□□ 0.06
C9orf47-202ENST00000375850 FLI1Q01543 452 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-202ENST00000375850 IFITM3Q01628 133 aa15.44■□□□□ 0.06
C9orf47-202ENST00000375850 COX11Q9Y6N1 276 aa15.44■□□□□ 0.06
C9orf47-202ENST00000375850 FLG2Q5D862 2391 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-202ENST00000375850 A8MWV9 139 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 HMGB3O15347 200 aaKnown RBP15.43■□□□□ 0.06
C9orf47-202ENST00000375850 MBP02144 154 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 PLA2G1BP04054 148 aaKnown RBP15.43■□□□□ 0.06
C9orf47-202ENST00000375850 CYB561D1Q8N8Q1 229 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 TMEM75Q8N9X5 138 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 SGK494Q96LW2 274 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 PSMG3Q9BT73 122 aaPredicted RBP15.43■□□□□ 0.06
C9orf47-202ENST00000375850 TMEM167BQ9NRX6 74 aa15.43■□□□□ 0.06
C9orf47-202ENST00000375850 A0A087WWC5 75 aa15.42■□□□□ 0.06
C9orf47-202ENST00000375850 PGPEP1LA6NFU8 196 aa15.42■□□□□ 0.06
C9orf47-202ENST00000375850 RNASE3P12724 160 aaKnown RBP15.42■□□□□ 0.06
C9orf47-202ENST00000375850 J3QL48 77 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 GCHFRP30047 84 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 SERF2P84101 59 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 RAB24Q969Q5 203 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 FAM30AQ9NZY2 134 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 EPDR1Q9UM22 224 aa15.41■□□□□ 0.06
C9orf47-202ENST00000375850 IGLV2-11P01706 119 aa15.4■□□□□ 0.06
C9orf47-202ENST00000375850 SEC11BP0C7V7 166 aa15.4■□□□□ 0.06
C9orf47-202ENST00000375850 FGF8P55075 233 aaPredicted RBP15.4■□□□□ 0.06
C9orf47-202ENST00000375850 SUMO1P63165 101 aaKnown RBP15.4■□□□□ 0.06
C9orf47-202ENST00000375850 Q6ZSA8 131 aa15.4■□□□□ 0.06
C9orf47-202ENST00000375850 PRNTQ86SH4 94 aa15.4■□□□□ 0.06
C9orf47-202ENST00000375850 PARLQ9H300 379 aa15.4■□□□□ 0.06
C9orf47-202ENST00000375850 CXorf1O96002 111 aa15.39■□□□□ 0.05
C9orf47-202ENST00000375850 S100A4P26447 101 aaKnown RBP15.39■□□□□ 0.05
C9orf47-202ENST00000375850 GGTLC3B5MD39 225 aa15.38■□□□□ 0.05
C9orf47-202ENST00000375850 LINC00694P0DN24 101 aa15.38■□□□□ 0.05
C9orf47-202ENST00000375850 RMI2Q96E14 147 aa15.38■□□□□ 0.05
C9orf47-202ENST00000375850 HSD17B11Q8NBQ5 300 aa15.37■□□□□ 0.05
C9orf47-202ENST00000375850 A0A1W2PRE2 83 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 GAGE12JA6NER3 117 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 ASIPP42127 132 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 GAGE1Q13065 139 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 GAGE4Q13068 117 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 GAGE5Q13069 117 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 LGALSLQ3ZCW2 172 aaPredicted RBP15.36■□□□□ 0.05
C9orf47-202ENST00000375850 GAGE13Q4V321 117 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 ACTR3CQ9C0K3 210 aaPredicted RBP15.36■□□□□ 0.05
C9orf47-202ENST00000375850 TNFSF18Q9UNG2 199 aa15.36■□□□□ 0.05
C9orf47-202ENST00000375850 FABP5P3A8MUU1 101 aa15.35■□□□□ 0.05
C9orf47-202ENST00000375850 RHODO00212 210 aa15.35■□□□□ 0.05
C9orf47-202ENST00000375850 LINC00479Q96M42 142 aa15.35■□□□□ 0.05
C9orf47-202ENST00000375850 AQP10Q96PS8 301 aa15.35■□□□□ 0.05
C9orf47-202ENST00000375850 IL36BQ9NZH7 164 aa15.35■□□□□ 0.05
C9orf47-202ENST00000375850 ATP6V0CP27449 155 aa15.34■□□□□ 0.05
C9orf47-202ENST00000375850 WFDC2Q14508 124 aa15.34■□□□□ 0.05
C9orf47-202ENST00000375850 DEFB104AQ8WTQ1 72 aa15.34■□□□□ 0.05
C9orf47-202ENST00000375850 URGCP-MRPS24S4R325 110 aa15.34■□□□□ 0.05
C9orf47-202ENST00000375850 IGKV3D-20A0A0C4DH25 116 aa15.33■□□□□ 0.04
C9orf47-202ENST00000375850 DAZ4Q86SG3 579 aaKnown RBP15.33■□□□□ 0.04
C9orf47-202ENST00000375850 LINC00528Q8N1L1 170 aa15.33■□□□□ 0.04
C9orf47-202ENST00000375850 Q8N976 141 aa15.33■□□□□ 0.04
C9orf47-202ENST00000375850 SYT8Q8NBV8 401 aa15.33■□□□□ 0.04
C9orf47-202ENST00000375850 DAZ3Q9NR90 486 aaKnown RBP15.33■□□□□ 0.04
C9orf47-202ENST00000375850 KRTAP29-1A8MX34 341 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-202ENST00000375850 UFSP1Q6NVU6 142 aa15.32■□□□□ 0.04
C9orf47-202ENST00000375850 NKX6-2Q9C056 277 aaPredicted RBP15.32■□□□□ 0.04
C9orf47-202ENST00000375850 DNLZQ5SXM8 178 aa15.31■□□□□ 0.04
C9orf47-202ENST00000375850 Q8N3U1 123 aa15.31■□□□□ 0.04
C9orf47-202ENST00000375850 OR2T35Q8NGX2 323 aa15.31■□□□□ 0.04
C9orf47-202ENST00000375850 CHCHD7Q9BUK0 85 aa15.31■□□□□ 0.04
C9orf47-202ENST00000375850 ARL2-SNX15V9GYD0 113 aa15.31■□□□□ 0.04
C9orf47-202ENST00000375850 ELOBQ15370 118 aa15.3■□□□□ 0.04
C9orf47-202ENST00000375850 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.29■□□□□ 0.04
C9orf47-202ENST00000375850 LECT2O14960 151 aa15.29■□□□□ 0.04
C9orf47-202ENST00000375850 IFNA7P01567 189 aa15.29■□□□□ 0.04
C9orf47-202ENST00000375850 HIST1H2BAQ96A08 127 aa15.29■□□□□ 0.04
C9orf47-202ENST00000375850 B4DEV8 164 aa15.28■□□□□ 0.04
C9orf47-202ENST00000375850 NIT1Q86X76 327 aa15.28■□□□□ 0.04
C9orf47-202ENST00000375850 OR11H4Q8NGC9 324 aa15.28■□□□□ 0.04
C9orf47-202ENST00000375850 BAALCQ8WXS3 180 aa15.28■□□□□ 0.04
C9orf47-202ENST00000375850 RBFOX3A6NFN3 312 aa15.27■□□□□ 0.04
C9orf47-202ENST00000375850 KCNIP4Q6PIL6 250 aa15.27■□□□□ 0.04
C9orf47-202ENST00000375850 COX8CQ7Z4L0 72 aa15.27■□□□□ 0.04
C9orf47-202ENST00000375850 C14orf178Q8N769 122 aaPredicted RBP15.27■□□□□ 0.04
C9orf47-202ENST00000375850 SAMD10Q9BYL1 202 aa15.27■□□□□ 0.04
C9orf47-202ENST00000375850 ZFP30Q9Y2G7 519 aa15.27■□□□□ 0.04
C9orf47-202ENST00000375850 DNAH8Q96JB1 4490 aa15.27■□□□□ 0.03
C9orf47-202ENST00000375850 TRAV34A0A0B4J273 112 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 H3BVH4 76 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 PEX7O00628 323 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 DMRTA1Q5VZB9 504 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 Q86TA4 180 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 JPT2Q9H910 190 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
C9orf47-202ENST00000375850 IGKV2D-24A0A075B6R9 120 aa15.25■□□□□ 0.03
C9orf47-202ENST00000375850 A0A087WX48 190 aa15.25■□□□□ 0.03
C9orf47-202ENST00000375850 BORCS7-ASMTA0A0B4J1R7 106 aa15.25■□□□□ 0.03
C9orf47-202ENST00000375850 TRBV10-1A0A0K0K1A3 114 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms