RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 A0A1W2PPR1 153 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 COPS9Q8WXC6 57 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 SPCS1Q9Y6A9 102 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 CFAP54Q96N23 3096 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 A0A096LPF7 62 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 HIST2H2BDQ6DRA6 164 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
PTPDC1-202ENST00000375360 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 ZNF625Q96I27 306 aaPredicted RBP13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 RHODO00212 210 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 C2orf70A6NJV1 201 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 ORAOV1Q8WV07 137 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 CCDC140Q96MF4 163 aa13.84□□□□□ -0.19
PTPDC1-202ENST00000375360 DNAL4O96015 105 aa13.83□□□□□ -0.19
PTPDC1-202ENST00000375360 POLR3KQ9Y2Y1 108 aaPredicted RBP13.83□□□□□ -0.19
PTPDC1-202ENST00000375360 CITED2Q99967 270 aaPredicted RBP13.83□□□□□ -0.2
PTPDC1-202ENST00000375360 LINC01549A6NIU2 74 aa13.83□□□□□ -0.2
PTPDC1-202ENST00000375360 A8MWV9 139 aa13.83□□□□□ -0.2
PTPDC1-202ENST00000375360 Q8N8P6 123 aa13.83□□□□□ -0.2
PTPDC1-202ENST00000375360 PLNP26678 52 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 LINC00158P58513 81 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 DAD1P61803 113 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 C10orf99Q6UWK7 81 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 IGLC2P0DOY2 106 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 NOP10Q9NPE3 64 aaKnown RBP13.82□□□□□ -0.2
PTPDC1-202ENST00000375360 LY6LH3BQJ8 138 aa13.81□□□□□ -0.2
PTPDC1-202ENST00000375360 TMEM61Q8N0U2 210 aa13.81□□□□□ -0.2
PTPDC1-202ENST00000375360 IGF2BP2-AS1Q96M15 143 aa13.81□□□□□ -0.2
PTPDC1-202ENST00000375360 GTSF1Q8WW33 167 aa13.81□□□□□ -0.2
PTPDC1-202ENST00000375360 A0A1B0GWB2 263 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 LINC01559Q495D7 138 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 NUPR1O60356 82 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 MRPL53Q96EL3 112 aaKnown RBP13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 SPAG8Q99932 426 aaPredicted RBP13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 RNASE13Q5GAN3 156 aaKnown RBP13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 LENEPQ9Y5L5 61 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 U3KQE9 123 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 MEGF9Q9H1U4 602 aa13.8□□□□□ -0.2
PTPDC1-202ENST00000375360 DNAJC9-AS1A6NH13 148 aa13.79□□□□□ -0.2
PTPDC1-202ENST00000375360 FSTL3O95633 263 aa13.79□□□□□ -0.2
PTPDC1-202ENST00000375360 GPHB5Q86YW7 130 aa13.79□□□□□ -0.2
PTPDC1-202ENST00000375360 RBAKDNA6NC62 111 aa13.79□□□□□ -0.2
PTPDC1-202ENST00000375360 HSD52Q0P140 79 aa13.78□□□□□ -0.2
PTPDC1-202ENST00000375360 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
PTPDC1-202ENST00000375360 I3L3M4 83 aa13.78□□□□□ -0.2
PTPDC1-202ENST00000375360 CRYGBP07316 175 aa13.78□□□□□ -0.2
PTPDC1-202ENST00000375360 MRPL35Q9NZE8 188 aaKnown RBP13.78□□□□□ -0.2
PTPDC1-202ENST00000375360 KRTAP10-9P60411 292 aa13.77□□□□□ -0.2
PTPDC1-202ENST00000375360 CKS1BP61024 79 aa13.77□□□□□ -0.2
PTPDC1-202ENST00000375360 MRAPQ8TCY5 172 aa13.77□□□□□ -0.2
PTPDC1-202ENST00000375360 CHAC1Q9BUX1 264 aa13.77□□□□□ -0.2
PTPDC1-202ENST00000375360 KLF12Q9Y4X4 402 aa13.77□□□□□ -0.2
PTPDC1-202ENST00000375360 COL5A1P20908 1838 aaPredicted RBP13.77□□□□□ -0.21
PTPDC1-202ENST00000375360 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 GAGE6Q13070 117 aa13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 IGLL1P15814 213 aa13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 SRSF2Q01130 221 aaKnown RBP13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 CDPF1Q6NVV7 123 aa13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 RPL39LQ96EH5 51 aaKnown RBP13.76□□□□□ -0.21
PTPDC1-202ENST00000375360 LINC00322Q6ZN03 302 aaPredicted RBP13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 PRIMA1Q86XR5 153 aa13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 VWC2LB2RUY7 222 aa13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 K7EMT4 169 aa13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 TIMM21Q9BVV7 248 aa13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 M0R2P5 195 aa13.75□□□□□ -0.21
PTPDC1-202ENST00000375360 HLA-DRB4P13762 266 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 MAJINQ3KP22 176 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 ADAMTSL5Q6ZMM2 481 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 ZNF479Q96JC4 524 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 HLA-DRB4X5D2U9 266 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 A0A0J9YY99 117 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 IGHG4P01861 327 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 EBI3Q14213 229 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 PLEKHB2Q96CS7 222 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 MORN3Q6PF18 240 aaPredicted RBP13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 Q6ZS46 218 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 ESDP10768 282 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 SEC11AP67812 179 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 Q8N1Y9 231 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 DKK2Q9UBU2 259 aa13.74□□□□□ -0.21
PTPDC1-202ENST00000375360 MGAQ8IWI9 3026 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 UBE2DNLQ8IWF7 75 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 ESM1Q9NQ30 184 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 MRPS16Q9Y3D3 137 aaKnown RBP13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 PAX4O43316 350 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 AVPP01185 164 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 IGF1P05019 195 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 APOC4P55056 127 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 EXPH5Q8NEV8 1989 aa13.73□□□□□ -0.21
PTPDC1-202ENST00000375360 PMVKQ15126 192 aa13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 C21orf62-AS1Q17RA5 79 aa13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 LINC00173Q6ZV60 143 aa13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 TRBV25-1A0A075B6N4 114 aa13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 ZNF48Q96MX3 618 aaPredicted RBP13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 TMEM238C9JI98 176 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms