RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 UBE2WQ96B02 151 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 MBD6Q96DN6 1003 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 CHCHD5Q9BSY4 110 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 PRSS29PA6NIE9 313 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 NDUFA4O00483 81 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 INSP01308 110 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 TRBV25-1A0A075B6N4 114 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 F8VRH5 84 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 ZNF80P51504 273 aaPredicted RBP5.07□□□□□ -1.6
SMC1A-202ENST00000375340 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 TRBV12-3P01733 135 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 IGHV4-38-2P0DP08 117 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 FGF6P10767 208 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 RBAKDNA6NC62 111 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.07□□□□□ -1.6
SMC1A-202ENST00000375340 IGHV1OR15-1A0A075B7D0 117 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 IGKV2-29A2NJV5 120 aaPredicted RBP5.07□□□□□ -1.6
SMC1A-202ENST00000375340 RPL39P62891 51 aaKnown RBP5.07□□□□□ -1.6
SMC1A-202ENST00000375340 DEFB136Q30KP8 78 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 RNF223E7ERA6 249 aa5.07□□□□□ -1.6
SMC1A-202ENST00000375340 ANKRD11Q6UB99 2663 aaPredicted RBP5.06□□□□□ -1.6
SMC1A-202ENST00000375340 CTRLP40313 264 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 VWC2LB2RUY7 222 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 LINC01356Q8N9X3 169 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 BAALCQ8WXS3 180 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 C1QTNF4Q9BXJ3 329 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 B4DSR2 109 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 LEPROTO15243 131 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 PTPN13Q12923 2485 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 J3QQQ9 107 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 MSMBP08118 114 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 LINC00310P59036 64 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 Q71RC1 249 aaPredicted RBP5.06□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE12JA6NER3 117 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 CRPP02741 224 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE4Q13068 117 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE5Q13069 117 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 PPDPFLQ8WWR9 84 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 ATP6V0BQ99437 205 aa5.06□□□□□ -1.6
SMC1A-202ENST00000375340 WFDC2Q14508 124 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 RASL10AQ92737 203 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 ODF1Q14990 250 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
SMC1A-202ENST00000375340 PCSK5Q92824 1860 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 C20orf78Q9BR46 151 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 G3V4G9 280 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 TAL2Q16559 108 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
SMC1A-202ENST00000375340 LINC01548A6NM66 108 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 C10orf142B7Z368 130 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 LINC01619G3V211 115 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 PAX4O43316 350 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CRIP1P50238 77 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 C20orf173Q96LM9 149 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CENPVL3A0A0U1RRI6 287 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 C5orf56Q8N8D9 126 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 IGLV2-11P01706 119 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 DAND5Q8N907 189 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 Q8N9W7 124 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 INS-IGF2F8WCM5 200 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 SLC25A20O43772 301 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 HIST1H4AP62805 103 aaKnown RBP5.04□□□□□ -1.6
SMC1A-202ENST00000375340 PRIMA1Q86XR5 153 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 OPRPNQ99935 248 aaPredicted RBP5.04□□□□□ -1.6
SMC1A-202ENST00000375340 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 IGF2RP11717 2491 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 BOD1L2Q8IYS8 172 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 DSCAMO60469 2012 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 IGHV4-59P01825 116 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 IGF1P05019 195 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 TCTEX1D4Q5JR98 221 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CARD19Q96LW7 228 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 NDUFA12Q9UI09 145 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CGB3P0DN86 165 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CGB7P0DN87 165 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 CLPSL2Q6UWE3 100 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 Q8N976 141 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 NRGNQ92686 78 aa5.04□□□□□ -1.6
SMC1A-202ENST00000375340 BUB3O43684 328 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 FOXI2Q6ZQN5 318 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 APRG1Q8IVJ8 170 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 EDA2RQ9HAV5 297 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 SETD2Q9BYW2 2564 aaPredicted RBP5.03□□□□□ -1.6
SMC1A-202ENST00000375340 IGLV1-47P01700 117 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 SLURP1P55000 103 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 ZNF493Q6ZR52 646 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 JPT2Q9H910 190 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 LGALS1P09382 135 aaKnown RBP5.03□□□□□ -1.6
SMC1A-202ENST00000375340 RPL36AP83881 106 aaKnown RBP5.03□□□□□ -1.6
SMC1A-202ENST00000375340 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 ZFP2Q6ZN57 461 aa5.03□□□□□ -1.6
SMC1A-202ENST00000375340 RPL36ALQ969Q0 106 aaKnown RBP5.03□□□□□ -1.6
SMC1A-202ENST00000375340 CRYGCP07315 174 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms