RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NACAE9PAV3 2078 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 IGLV2-18A0A075B6J9 118 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 IGKCP01834 107 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 DPF1Q92782 380 aa12.86□□□□□ -0.35
RXRB-201ENST00000374680 F5H697 171 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 SOCS3O14543 225 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 KLK9Q2XQG4 91 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 PSMG4Q5JS54 123 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 FAM74A4Q5TZK3 123 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
RXRB-201ENST00000374680 KLK9Q9UKQ9 250 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 RNF223E7ERA6 249 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 EMP1P54849 157 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 OVOL1O14753 267 aa12.85□□□□□ -0.35
RXRB-201ENST00000374680 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
RXRB-201ENST00000374680 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
RXRB-201ENST00000374680 SYNJ2BPP57105 145 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 AP1S3Q96PC3 154 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 NIPBLQ6KC79 2804 aaeCLIP12.84□□□□□ -0.35
RXRB-201ENST00000374680 A0A0G2JLM5 398 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 CD7P09564 240 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 RASL10AQ92737 203 aa12.84□□□□□ -0.35
RXRB-201ENST00000374680 K7ERJ3 54 aa12.83□□□□□ -0.36
RXRB-201ENST00000374680 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.365e-13■■■□□ 15
RXRB-201ENST00000374680 NDUFS8O00217 210 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 DEFB136Q30KP8 78 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 DUX3Q96PT4 197 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 ZNF469Q96JG9 3925 aaPredicted RBP12.82□□□□□ -0.36
RXRB-201ENST00000374680 DPM2O94777 84 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 RNASE3P12724 160 aaKnown RBP12.82□□□□□ -0.36
RXRB-201ENST00000374680 KRTAP10-9P60411 292 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 MAPKAPK5-AS1Q8N8E1 139 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 JMJD1CQ15652 2540 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 IGLV1-40P01703 118 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
RXRB-201ENST00000374680 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
RXRB-201ENST00000374680 PRM2P04554 102 aa12.81□□□□□ -0.36
RXRB-201ENST00000374680 FAM159AQ6UWV7 190 aa12.81□□□□□ -0.36
RXRB-201ENST00000374680 CRIP2P52943 208 aaPredicted RBP12.81□□□□□ -0.36
RXRB-201ENST00000374680 ADAMTSL5Q6ZMM2 481 aa12.81□□□□□ -0.36
RXRB-201ENST00000374680 FXYD2P54710 66 aa12.8□□□□□ -0.36
RXRB-201ENST00000374680 JMJD8Q96S16 334 aa12.8□□□□□ -0.36
RXRB-201ENST00000374680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
RXRB-201ENST00000374680 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
RXRB-201ENST00000374680 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
RXRB-201ENST00000374680 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
RXRB-201ENST00000374680 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
RXRB-201ENST00000374680 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
RXRB-201ENST00000374680 BBC3Q96PG8 261 aaPredicted RBP12.79□□□□□ -0.36
RXRB-201ENST00000374680 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
RXRB-201ENST00000374680 ATP5LO75964 103 aa12.78□□□□□ -0.36
RXRB-201ENST00000374680 KHDC1LQ5JSQ8 128 aa12.78□□□□□ -0.36
RXRB-201ENST00000374680 HSD52Q0P140 79 aa12.78□□□□□ -0.36
RXRB-201ENST00000374680 TRBV25-1A0A075B6N4 114 aa12.78□□□□□ -0.36
RXRB-201ENST00000374680 DCANP1Q8TF63 244 aa12.77□□□□□ -0.36
RXRB-201ENST00000374680 APCP25054 2843 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 NBPF19A0A087WUL8 3843 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 A6NDN8 102 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 PSMB8P28062 276 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 RBX1P62877 108 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 SEC11AP67812 179 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 C2orf66Q6UXQ4 117 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 OR9G4Q8NGQ1 327 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.37
RXRB-201ENST00000374680 NHP2Q9NX24 153 aaKnown RBP12.77□□□□□ -0.37
RXRB-201ENST00000374680 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
RXRB-201ENST00000374680 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 LENEPQ9Y5L5 61 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 ID1P41134 155 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 RPL39P62891 51 aaKnown RBP12.76□□□□□ -0.37
RXRB-201ENST00000374680 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
RXRB-201ENST00000374680 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 A0A087WW49 117 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 C11orf44Q8N8P7 122 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 IGHV3-73A0A0B4J1V6 119 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
RXRB-201ENST00000374680 DUSP14O95147 198 aaKnown RBP12.75□□□□□ -0.37
RXRB-201ENST00000374680 ZMAT4Q9H898 229 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 A0A087WX48 190 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 CFHR3Q02985 330 aa12.75□□□□□ -0.37
RXRB-201ENST00000374680 CHTOPQ9Y3Y2 248 aaKnown RBP12.75□□□□□ -0.37
RXRB-201ENST00000374680 FLNAP21333 2647 aaKnown RBP12.74□□□□□ -0.37
RXRB-201ENST00000374680 H3BUA1 57 aa12.74□□□□□ -0.37
RXRB-201ENST00000374680 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
RXRB-201ENST00000374680 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
RXRB-201ENST00000374680 ITPR3Q14573 2671 aa12.73□□□□□ -0.37
RXRB-201ENST00000374680 C9orf118A6NHY6 69 aa12.73□□□□□ -0.37
RXRB-201ENST00000374680 CDKN1BP46527 198 aa12.73□□□□□ -0.37
RXRB-201ENST00000374680 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
RXRB-201ENST00000374680 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
RXRB-201ENST00000374680 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 COX6B1P14854 86 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms