RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 TRBV12-3P01733 135 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 AZU1P20160 251 aa12.88□□□□□ -0.35
PHF1-202ENST00000374516 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
PHF1-202ENST00000374516 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 SPANXB1Q9NS25 103 aaPredicted RBP12.87□□□□□ -0.35
PHF1-202ENST00000374516 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 IGHV3-11P01762 117 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 LAGE3Q14657 143 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 TAL2Q16559 108 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 C12orf74Q32Q52 190 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
PHF1-202ENST00000374516 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
PHF1-202ENST00000374516 PRSS47A8MTI9 375 aa12.86□□□□□ -0.35
PHF1-202ENST00000374516 TMEM95Q3KNT9 176 aa12.86□□□□□ -0.35
PHF1-202ENST00000374516 Q5PR19 223 aa12.86□□□□□ -0.35
PHF1-202ENST00000374516 ZNF479Q96JC4 524 aa12.86□□□□□ -0.35
PHF1-202ENST00000374516 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 PF4V1P10720 104 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 HIST2H2BCQ6DN03 193 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 NRACQ8N912 160 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 C11orf21Q9P2W6 132 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 A0A087WX48 190 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 H3BMG7 143 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 SCGB1A1P11684 91 aa12.85□□□□□ -0.35
PHF1-202ENST00000374516 HELZ2Q9BYK8 2649 aaKnown RBP12.85□□□□□ -0.35
PHF1-202ENST00000374516 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 ARL3P36405 182 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 TSSC4Q9Y5U2 329 aaPredicted RBP12.84□□□□□ -0.35
PHF1-202ENST00000374516 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 METTL26Q96S19 204 aa12.84□□□□□ -0.35
PHF1-202ENST00000374516 J3QR89 54 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 SMAGPQ0VAQ4 97 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 SH2D6Q7Z4S9 175 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 Q96MF0 132 aa12.83□□□□□ -0.36
PHF1-202ENST00000374516 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
PHF1-202ENST00000374516 J3QLI3 93 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 PLNP26678 52 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
PHF1-202ENST00000374516 ITPR3Q14573 2671 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 IGHV7-4-1A0A0J9YVY3 117 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 ETDBQ3ZM63 59 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
PHF1-202ENST00000374516 CR1P17927 2039 aa12.81□□□□□ -0.36
PHF1-202ENST00000374516 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
PHF1-202ENST00000374516 KMT2BQ9UMN6 2715 aaPredicted RBP12.81□□□□□ -0.36
PHF1-202ENST00000374516 RAB9AP51151 201 aa12.8□□□□□ -0.36
PHF1-202ENST00000374516 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
PHF1-202ENST00000374516 TRBV7-3A0A075B6L6 115 aa12.8□□□□□ -0.36
PHF1-202ENST00000374516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
PHF1-202ENST00000374516 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
PHF1-202ENST00000374516 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
PHF1-202ENST00000374516 H7C1H1 209 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 C10orf99Q6UWK7 81 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 USMG5Q96IX5 58 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
PHF1-202ENST00000374516 IGHV4-4A0A075B6R2 117 aa12.79□□□□□ -0.36
PHF1-202ENST00000374516 AGRNO00468 2067 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 TRAV12-1A0A0B4J245 112 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 A0A1B0GWB2 263 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 F8VRH5 84 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 PRO0461Q9UI25 63 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 U3KQE9 123 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 ITPR2Q14571 2701 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 MYMXA0A1B0GTQ4 84 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 H3BUA1 57 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 TMEM78Q5T7P6 136 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 Q6ZQT7 251 aa12.78□□□□□ -0.36
PHF1-202ENST00000374516 MYO9AB2RTY4 2548 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 LINC01619G3V211 115 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 CFHR3Q02985 330 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 LRRC75A-AS1Q8N1F1 130 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 ATP6V0BQ99437 205 aa12.77□□□□□ -0.36
PHF1-202ENST00000374516 FLNAP21333 2647 aaKnown RBP12.77□□□□□ -0.37
PHF1-202ENST00000374516 TRAV8-2A0A0B4J237 113 aa12.77□□□□□ -0.37
PHF1-202ENST00000374516 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.37
PHF1-202ENST00000374516 MTURNQ8N3F0 131 aa12.77□□□□□ -0.37
PHF1-202ENST00000374516 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 NDUFA4O00483 81 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 BRI3O95415 125 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 MRAP2Q96G30 205 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 SMIM2Q9BVW6 85 aa12.76□□□□□ -0.37
PHF1-202ENST00000374516 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
PHF1-202ENST00000374516 FSHBP01225 129 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms