RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 COL12A1Q99715 3063 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 IGHV3-16A0A0C4DH30 117 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 EBI3Q14213 229 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
CLIC4-201ENST00000374379 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 SMIM13P0DJ93 91 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 AVPP01185 164 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 RPL35AP18077 110 aaKnown RBP10.38□□□□□ -0.75
CLIC4-201ENST00000374379 Q6ZQT7 251 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 Q8N6K4 173 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 ZNF418Q8TF45 676 aaPredicted RBP10.38□□□□□ -0.75
CLIC4-201ENST00000374379 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
CLIC4-201ENST00000374379 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
CLIC4-201ENST00000374379 CBY1Q9Y3M2 126 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 C2orf66Q6UXQ4 117 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 ZFAND3Q9H8U3 227 aa10.38□□□□□ -0.75
CLIC4-201ENST00000374379 FLNBO75369 2602 aaKnown RBP10.38□□□□□ -0.75
CLIC4-201ENST00000374379 SAMD13Q5VXD3 122 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 TRGV2A0A075B6R0 118 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 C2orf70A6NJV1 201 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 ESDP10768 282 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 FOSL1P15407 271 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
CLIC4-201ENST00000374379 A0A0U1RRA0 63 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 VCX2Q9H322 139 aa10.37□□□□□ -0.75
CLIC4-201ENST00000374379 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 A0A087WW49 117 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 A6NDX4 124 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 H7C1H1 209 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 Q8N8P6 123 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 HECTD1Q9ULT8 2610 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 ZNF48Q96MX3 618 aaPredicted RBP10.36□□□□□ -0.75
CLIC4-201ENST00000374379 JPT2Q9H910 190 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 CDKN1BP46527 198 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 ZNF124Q15973 351 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 DEFB113Q30KQ7 82 aa10.36□□□□□ -0.75
CLIC4-201ENST00000374379 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
CLIC4-201ENST00000374379 TRGV1A0A0A0MS02 117 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 APRG1Q8IVJ8 170 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 SDHAF1A6NFY7 115 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 F8W735 103 aaPredicted RBP10.35□□□□□ -0.75
CLIC4-201ENST00000374379 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
CLIC4-201ENST00000374379 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 LURAP1LQ8IV03 231 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 K7EMI3 77 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 CD28P10747 220 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
CLIC4-201ENST00000374379 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
CLIC4-201ENST00000374379 IGHV1OR15-1A0A075B7D0 117 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 LINC01619G3V211 115 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 VCYO14598 125 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 HSD52Q0P140 79 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 COL27A1Q8IZC6 1860 aaPredicted RBP10.33□□□□□ -0.76
CLIC4-201ENST00000374379 CFHR3Q02985 330 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 UBE2L6O14933 153 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 EDN2P20800 178 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 ZFHX4Q86UP3 3567 aa10.33□□□□□ -0.76
CLIC4-201ENST00000374379 J3QLI3 93 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 AGRNO00468 2067 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 J3QR89 54 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 K7ERU9 68 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
CLIC4-201ENST00000374379 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 H3BUA1 57 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 ELANEP08246 267 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 COX8AP10176 69 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 CTRLP40313 264 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 KRTAP10-9P60411 292 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 LGALS9BQ3B8N2 356 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 LGALS9CQ6DKI2 356 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 TMEM238LA0A1B0GVL6 79 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 A6NJY4 79 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 C9orf47Q6ZRZ4 202 aa10.32□□□□□ -0.76
CLIC4-201ENST00000374379 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
CLIC4-201ENST00000374379 NPC2P61916 151 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 OR9G4Q8NGQ1 327 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 MEGF9Q9H1U4 602 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 PAX2Q02962 417 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 CHAC1Q9BUX1 264 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
CLIC4-201ENST00000374379 TRAV8-2A0A0B4J237 113 aa10.3□□□□□ -0.76
CLIC4-201ENST00000374379 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
CLIC4-201ENST00000374379 HTN3P15516 51 aa10.3□□□□□ -0.76
CLIC4-201ENST00000374379 MRPL53Q96EL3 112 aaKnown RBP10.3□□□□□ -0.76
CLIC4-201ENST00000374379 TOMM7Q9P0U1 55 aa10.3□□□□□ -0.76
CLIC4-201ENST00000374379 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
CLIC4-201ENST00000374379 SEC11AP67812 179 aa10.29□□□□□ -0.76
CLIC4-201ENST00000374379 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms