RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 TMEM61Q8N0U2 210 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 TNFRSF6BO95407 300 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 EVI2AP22794 236 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 PMCHL1Q16048 86 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.92
PRPF4-202ENST00000374199 C20orf202A1L168 122 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 LY6G6DO95868 133 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 CKS2P33552 79 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 MUC21Q5SSG8 566 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
PRPF4-202ENST00000374199 GNRH2O43555 120 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 RBMY1A1P0DJD3 496 aaKnown RBP9.26□□□□□ -0.93
PRPF4-202ENST00000374199 RBMY1CP0DJD4 496 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 TSPOP30536 169 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 RBMY1FQ15415 496 aaKnown RBP9.26□□□□□ -0.93
PRPF4-202ENST00000374199 Q8N8P6 123 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 NXT2Q9NPJ8 142 aaKnown RBP9.26□□□□□ -0.93
PRPF4-202ENST00000374199 K7EMI3 77 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 OR2K2Q8NGT1 345 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 CCL24O00175 119 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 ZNF25P17030 456 aaPredicted RBP9.26□□□□□ -0.93
PRPF4-202ENST00000374199 KRTDAPP60985 99 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
PRPF4-202ENST00000374199 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
PRPF4-202ENST00000374199 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
PRPF4-202ENST00000374199 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
PRPF4-202ENST00000374199 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
PRPF4-202ENST00000374199 JMJD8Q96S16 334 aa9.25□□□□□ -0.93
PRPF4-202ENST00000374199 CITED2Q99967 270 aaPredicted RBP9.25□□□□□ -0.93
PRPF4-202ENST00000374199 IGKV3-7A0A075B6H7 116 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 RASL10AQ92737 203 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 NF1P21359 2839 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 KRTAP10-3P60369 221 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 CD300EQ496F6 205 aaPredicted RBP9.24□□□□□ -0.93
PRPF4-202ENST00000374199 UFSP1Q6NVU6 142 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 ZNF705AQ6ZN79 300 aaPredicted RBP9.24□□□□□ -0.93
PRPF4-202ENST00000374199 SMR3AQ99954 134 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 M0R143 59 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 NCR2O95944 276 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 FA2HQ7L5A8 372 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 WFDC3Q8IUB2 231 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 DPF1Q92782 380 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 SELENOKQ9Y6D0 94 aa9.24□□□□□ -0.93
PRPF4-202ENST00000374199 IGHV1OR15-1A0A075B7D0 117 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 ODF3L2Q3SX64 289 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 PRSS3P2Q8NHM4 247 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 DUX3Q96PT4 197 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 HBDP02042 147 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 ZMAT4Q9H898 229 aa9.23□□□□□ -0.93
PRPF4-202ENST00000374199 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 FCER1GP30273 86 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 TRAV12-3A0A0B4J271 114 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 TRBV6-5A0A0K0K1A5 114 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
PRPF4-202ENST00000374199 Q8N1Y9 231 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 AP1S3Q96PC3 154 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 C19orf73Q9NVV2 129 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 OR4C46A6NHA9 309 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
PRPF4-202ENST00000374199 TFPI2P48307 235 aa9.21□□□□□ -0.93
PRPF4-202ENST00000374199 LGALS9BQ3B8N2 356 aa9.21□□□□□ -0.93
PRPF4-202ENST00000374199 LGALS9CQ6DKI2 356 aa9.21□□□□□ -0.93
PRPF4-202ENST00000374199 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.93
PRPF4-202ENST00000374199 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.93
PRPF4-202ENST00000374199 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
PRPF4-202ENST00000374199 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.94
PRPF4-202ENST00000374199 NDUFA11Q86Y39 141 aa9.21□□□□□ -0.94
PRPF4-202ENST00000374199 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
PRPF4-202ENST00000374199 PPP1R17O96001 155 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 DEFB131AP59861 70 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 BATFQ16520 125 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 SPINK13Q1W4C9 94 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 MDFICQ9P1T7 246 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 CRYGDP07320 174 aa9.2□□□□□ -0.94
PRPF4-202ENST00000374199 TRAV12-2A0A075B6T6 113 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 KNCNA6PVL3 124 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 NPSP0C0P6 89 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 J3KRW8 73 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 C21orf62-AS1Q17RA5 79 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
PRPF4-202ENST00000374199 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms