RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 C2orf66Q6UXQ4 117 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 C11orf21Q9P2W6 132 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 ATXN8Q156A1 80 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 C21orf62Q9NYP8 219 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 CSDC2Q9Y534 153 aaKnown RBP9.88□□□□□ -0.83
PRPF4-201ENST00000374198 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 SMG1Q96Q15 3661 aaKnown RBP9.88□□□□□ -0.83
PRPF4-201ENST00000374198 DUSP14O95147 198 aaKnown RBP9.88□□□□□ -0.83
PRPF4-201ENST00000374198 PLA2G2AP14555 144 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 ATP5J2P56134 94 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 GFRALQ6UXV0 394 aa9.88□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 C11orf86A6NJI1 115 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 H3BMM0 161 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
PRPF4-201ENST00000374198 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 SLC50A1Q9BRV3 221 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 CADP27708 2225 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 A4D1N5 150 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
PRPF4-201ENST00000374198 CRYGDP07320 174 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 DLX6P56179 175 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
PRPF4-201ENST00000374198 TMEM263Q8WUH6 116 aaKnown RBP9.87□□□□□ -0.83
PRPF4-201ENST00000374198 CFAP46Q8IYW2 2715 aa9.87□□□□□ -0.83
PRPF4-201ENST00000374198 TRBV10-2A0A0K0K1G8 114 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 PRAC2D3DTV9 90 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 H7C2G1 150 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 J3QKU1 62 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 ELANEP08246 267 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 DNAJC30Q96LL9 226 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 BOD1L1Q8NFC6 3051 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV1-8P0DP01 117 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 CCL8P80075 99 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 C3orf36Q3SXR2 165 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 IGFL3Q6UXB1 125 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 FASNP49327 2511 aaKnown RBP9.86□□□□□ -0.83
PRPF4-201ENST00000374198 IGLV4-69A0A075B6H9 119 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV1-3A0A0C4DH29 117 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 NDUFB3O43676 98 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
PRPF4-201ENST00000374198 IGHG3P01860 377 aa9.85□□□□□ -0.83
PRPF4-201ENST00000374198 LINC00694P0DN24 101 aa9.85□□□□□ -0.83
PRPF4-201ENST00000374198 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
PRPF4-201ENST00000374198 ZNF56Q15929 161 aa9.85□□□□□ -0.83
PRPF4-201ENST00000374198 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 EMP1P54849 157 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 IGFL2Q6UWQ7 119 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 LYPD2Q6UXB3 125 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 M0R2P5 195 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 LOXP28300 417 aaPredicted RBP9.84□□□□□ -0.83
PRPF4-201ENST00000374198 MFAP4P55083 255 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 AMELXQ99217 191 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 ICE1Q9Y2F5 2266 aa9.84□□□□□ -0.83
PRPF4-201ENST00000374198 RBAKDNA6NC62 111 aa9.83□□□□□ -0.84
PRPF4-201ENST00000374198 Q8NA96 180 aa9.83□□□□□ -0.84
PRPF4-201ENST00000374198 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
PRPF4-201ENST00000374198 F8W735 103 aaPredicted RBP9.83□□□□□ -0.84
PRPF4-201ENST00000374198 Q1RN00 199 aa9.83□□□□□ -0.84
PRPF4-201ENST00000374198 FAM240AA0A1B0GVK7 77 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 C2orf82Q6UX34 121 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 C14orf178Q8N769 122 aaPredicted RBP9.82□□□□□ -0.84
PRPF4-201ENST00000374198 TRAV17A0A0B4J275 112 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 RNF223E7ERA6 249 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 TSHBP01222 138 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 DLX1P56177 255 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 NBASA2RRP1 2371 aa9.82□□□□□ -0.84
PRPF4-201ENST00000374198 RNF182Q8N6D2 247 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 J3QQQ9 107 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 IGLV1-47P01700 117 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 PRB3Q04118 309 aaPredicted RBP9.81□□□□□ -0.84
PRPF4-201ENST00000374198 EBI3Q14213 229 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
PRPF4-201ENST00000374198 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 BUB1B-PAK6H3BSN5 160 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 PMVKQ15126 192 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 BEX4Q9NWD9 120 aaPredicted RBP9.8□□□□□ -0.84
PRPF4-201ENST00000374198 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 LGALS3P17931 250 aaKnown RBP9.8□□□□□ -0.84
PRPF4-201ENST00000374198 HES1Q14469 280 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 MUSTN1Q8IVN3 82 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 FANCD2OSQ96PS1 177 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 SPXQ9BT56 116 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 RP1L1Q8IWN7 2480 aaPredicted RBP9.8□□□□□ -0.84
PRPF4-201ENST00000374198 MALRD1Q5VYJ5 2156 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
PRPF4-201ENST00000374198 TMEM178BH3BS89 294 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 H7C423 109 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 NDUFA7O95182 113 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 RNF5Q99942 180 aa9.8□□□□□ -0.84
PRPF4-201ENST00000374198 IGLV11-55A0A075B6I3 123 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 FAM236AA0A1B0GUQ0 79 aa9.79□□□□□ -0.84
PRPF4-201ENST00000374198 FAM236BA0A1B0GV22 79 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms