RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 XKRY2A2RUG3 117 aa13.25□□□□□ -0.29
CDX4-201ENST00000373514 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
CDX4-201ENST00000373514 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
CDX4-201ENST00000373514 NAGKQ9UJ70 344 aa13.25□□□□□ -0.29
CDX4-201ENST00000373514 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
CDX4-201ENST00000373514 SPINK4O60575 86 aa13.24□□□□□ -0.29
CDX4-201ENST00000373514 FAM222AQ5U5X8 452 aa13.24□□□□□ -0.29
CDX4-201ENST00000373514 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
CDX4-201ENST00000373514 C11orf45Q8TAV5 145 aa13.24□□□□□ -0.29
CDX4-201ENST00000373514 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
CDX4-201ENST00000373514 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 RPS10P46783 165 aaKnown RBP13.23□□□□□ -0.29
CDX4-201ENST00000373514 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 GRIFINA4D1Z8 144 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 CBY3A6NI87 242 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 TYMSP04818 313 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
CDX4-201ENST00000373514 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 DKK2Q9UBU2 259 aa13.23□□□□□ -0.29
CDX4-201ENST00000373514 CSMD3Q7Z407 3707 aa13.22□□□□□ -0.29
CDX4-201ENST00000373514 MRPL54Q6P161 138 aaKnown RBP13.22□□□□□ -0.29
CDX4-201ENST00000373514 C11orf72Q8NBR9 251 aa13.22□□□□□ -0.29
CDX4-201ENST00000373514 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
CDX4-201ENST00000373514 Q6ZTC4 211 aa13.21□□□□□ -0.29
CDX4-201ENST00000373514 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
CDX4-201ENST00000373514 STARD9Q9P2P6 4700 aa13.21□□□□□ -0.3
CDX4-201ENST00000373514 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
CDX4-201ENST00000373514 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
CDX4-201ENST00000373514 GSN-AS1Q9NRJ2 163 aa13.2□□□□□ -0.3
CDX4-201ENST00000373514 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
CDX4-201ENST00000373514 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
CDX4-201ENST00000373514 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
CDX4-201ENST00000373514 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
CDX4-201ENST00000373514 FER1L6-AS1Q8NA97 138 aa13.19□□□□□ -0.3
CDX4-201ENST00000373514 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 FAM159AQ6UWV7 190 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 GNRH2O43555 120 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 ARMS2P0C7Q2 107 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 CTRLP40313 264 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 CASC10Q5T4H9 136 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
CDX4-201ENST00000373514 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
CDX4-201ENST00000373514 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
CDX4-201ENST00000373514 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
CDX4-201ENST00000373514 TDRG1Q3Y452 100 aa13.17□□□□□ -0.3
CDX4-201ENST00000373514 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
CDX4-201ENST00000373514 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
CDX4-201ENST00000373514 LYRM9A8MSI8 78 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 TRGC2P03986 189 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 DEFB130BP0DP73 79 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 DEFB130AP0DP74 79 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 DAD1P61803 113 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 RASL11AQ6T310 242 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 PHLDA1Q8WV24 401 aaPredicted RBP13.16□□□□□ -0.3
CDX4-201ENST00000373514 BORCS7Q96B45 105 aa13.16□□□□□ -0.3
CDX4-201ENST00000373514 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 MUC21A0A0G2JKD1 596 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 MUC21A0A140T8X8 626 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 C1orf196B1AJZ1 125 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 ASIPP42127 132 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 CAMPP49913 170 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 HBBP68871 147 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 RIGQ13278 110 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 COX19Q49B96 90 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 WDR73Q6P4I2 378 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 Q6ZTI0 123 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
CDX4-201ENST00000373514 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 H3BVH4 76 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
CDX4-201ENST00000373514 RAB4BP61018 213 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 DNLZQ5SXM8 178 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
CDX4-201ENST00000373514 TRAPPC1Q9Y5R8 145 aa13.14□□□□□ -0.31
CDX4-201ENST00000373514 MUC4Q99102 2169 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 F2Z2F3 143 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 SNAI2O43623 268 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 GAGE7O76087 117 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 OR5AL1P0C617 328 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 SSTP61278 116 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 SSBP4Q9BWG4 385 aaPredicted RBP13.13□□□□□ -0.31
CDX4-201ENST00000373514 HTN3P15516 51 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 FABP9Q0Z7S8 132 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 FRZBQ92765 325 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 CNFNQ9BYD5 112 aa13.13□□□□□ -0.31
CDX4-201ENST00000373514 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
CDX4-201ENST00000373514 PHOX2AO14813 284 aa13.12□□□□□ -0.31
CDX4-201ENST00000373514 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
CDX4-201ENST00000373514 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
CDX4-201ENST00000373514 DAZ2Q13117 558 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms