RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SLC25A16P16260 332 aa11.27□□□□□ -0.61
COL9A2-202ENST00000372748 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
COL9A2-202ENST00000372748 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
COL9A2-202ENST00000372748 PRSS29PA6NIE9 313 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 MGPP08493 103 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 TOMM6Q96B49 74 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 ORMDL2Q53FV1 153 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 CELSR1Q9NYQ6 3014 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 TGFAP01135 160 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
COL9A2-202ENST00000372748 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
COL9A2-202ENST00000372748 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
COL9A2-202ENST00000372748 C1QTNF4Q9BXJ3 329 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 FHL3Q13643 280 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 METTL26Q96S19 204 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 SIRPDQ9H106 197 aa11.25□□□□□ -0.61
COL9A2-202ENST00000372748 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
COL9A2-202ENST00000372748 TSPAN13O95857 204 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 EBI3Q14213 229 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 C9orf47Q6ZRZ4 202 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 FAM110DQ8TAY7 271 aaPredicted RBP11.24□□□□□ -0.61
COL9A2-202ENST00000372748 USP24Q9UPU5 2620 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 MINOS1Q5TGZ0 78 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 C20orf173Q96LM9 149 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 CDIP1Q9H305 208 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 MINOS1-NBL1R4GNA1 71 aa11.24□□□□□ -0.61
COL9A2-202ENST00000372748 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 MT-ATP8P03928 68 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 SAA4P35542 130 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 LINC00527Q9UJ94 153 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 FLNCQ14315 2725 aa11.23□□□□□ -0.61
COL9A2-202ENST00000372748 IGHV3OR16-10A0A075B7F0 116 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 OOSP1A8MZH6 123 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 LINC01619G3V211 115 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
COL9A2-202ENST00000372748 AJUBAQ96IF1 538 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 A6NJY4 79 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
COL9A2-202ENST00000372748 UBE2D1P51668 147 aa11.21□□□□□ -0.61
COL9A2-202ENST00000372748 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.61
COL9A2-202ENST00000372748 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
COL9A2-202ENST00000372748 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.62
COL9A2-202ENST00000372748 GNRH2O43555 120 aa11.21□□□□□ -0.62
COL9A2-202ENST00000372748 COX6B1P14854 86 aa11.21□□□□□ -0.62
COL9A2-202ENST00000372748 BPESC1Q9GZL8 116 aa11.21□□□□□ -0.62
COL9A2-202ENST00000372748 C11orf86A6NJI1 115 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 XGP55808 180 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 F6UB75 175 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 CRYGDP07320 174 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 EEF1AKMT3Q96AZ1 226 aa11.2□□□□□ -0.62
COL9A2-202ENST00000372748 CD7P09564 240 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 ARL3P36405 182 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 UBE2E1P51965 193 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 Q6ZS46 218 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
COL9A2-202ENST00000372748 ASIPP42127 132 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
COL9A2-202ENST00000372748 TCL1BO95988 128 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 CRYBA4P53673 196 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 CFAP161Q6P656 301 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
COL9A2-202ENST00000372748 CENPEQ02224 2701 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 TSHBP01222 138 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 UCNP55089 124 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
COL9A2-202ENST00000372748 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 UTP20O75691 2785 aaKnown RBP11.18□□□□□ -0.62
COL9A2-202ENST00000372748 UBE2D3P61077 147 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 UBE2D2P62837 147 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
COL9A2-202ENST00000372748 Q6ZUT4 128 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 TP53TG1Q9Y2A0 90 aa11.18□□□□□ -0.62
COL9A2-202ENST00000372748 A0A0J9YY99 117 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 UNQ9165/PRO28630Q6UXU0 137 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 IGLV4-69A0A075B6H9 119 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 TRAV21A0A0B4J279 112 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 LMO4P61968 165 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 JPT2Q9H910 190 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 CRYBG3Q68DQ2 2970 aa11.17□□□□□ -0.62
COL9A2-202ENST00000372748 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
COL9A2-202ENST00000372748 GPHB5Q86YW7 130 aa11.16□□□□□ -0.62
COL9A2-202ENST00000372748 ITLN2Q8WWU7 325 aaPredicted RBP11.16□□□□□ -0.62
COL9A2-202ENST00000372748 U3KQE9 123 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms