RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 A0A0J9YX75 114 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 KLLNB2CW77 178 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 SNAI2O43623 268 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 MRPL51Q4U2R6 128 aaKnown RBP9.66□□□□□ -0.86
LDB3-203ENST00000372056 C9orf66Q5T8R8 295 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 C3orf56Q8N813 242 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 OR10AG1Q8NH19 301 aa9.66□□□□□ -0.86
LDB3-203ENST00000372056 D6R8Y8 96 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 SAP30O75446 220 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 IGLV1-51P01701 117 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 KRTAP24-1Q3LI83 254 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 C12orf54Q6X4T0 127 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 FOXI2Q6ZQN5 318 aa9.65□□□□□ -0.86
LDB3-203ENST00000372056 CUBNO60494 3623 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 IGHV4-4A0A075B6R2 117 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 M0R2Z0 102 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 TSPOP30536 169 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 TDRG1Q3Y452 100 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 ORMDL3Q8N138 153 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 Q8N976 141 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 KRTDAPP60985 99 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 CD300EQ496F6 205 aaPredicted RBP9.64□□□□□ -0.87
LDB3-203ENST00000372056 RNF185Q96GF1 192 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 PRELID3AQ96N28 172 aa9.64□□□□□ -0.87
LDB3-203ENST00000372056 H3BVH4 76 aa9.63□□□□□ -0.87
LDB3-203ENST00000372056 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
LDB3-203ENST00000372056 WFDC9Q8NEX5 89 aa9.63□□□□□ -0.87
LDB3-203ENST00000372056 C2CD3Q4AC94 2353 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 NPSP0C0P6 89 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 LEPP41159 167 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 ASIPP42127 132 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 CACNG7P62955 275 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 C3orf79P0CE67 100 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 CKS2P33552 79 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 PMCHL1Q16048 86 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 SPANXN1Q5VSR9 72 aa9.62□□□□□ -0.87
LDB3-203ENST00000372056 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 PPBPP02775 128 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 EVI2AP22794 236 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 PRIMA1Q86XR5 153 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 SCRT2Q9NQ03 307 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 ZNF256Q9Y2P7 627 aaPredicted RBP9.61□□□□□ -0.87
LDB3-203ENST00000372056 PAM16Q9Y3D7 125 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
LDB3-203ENST00000372056 C7orf71A4D174 169 aa9.6□□□□□ -0.87
LDB3-203ENST00000372056 NCR2O95944 276 aa9.6□□□□□ -0.87
LDB3-203ENST00000372056 NPYP01303 97 aa9.6□□□□□ -0.87
LDB3-203ENST00000372056 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
LDB3-203ENST00000372056 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
LDB3-203ENST00000372056 SORL1Q92673 2214 aa9.6□□□□□ -0.87
LDB3-203ENST00000372056 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 GNRH2O43555 120 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 IGKV3-20P01619 116 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 SMIM15Q7Z3B0 74 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 PRSS3P2Q8NHM4 247 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 TIMM8BQ9Y5J9 83 aaPredicted RBP9.59□□□□□ -0.87
LDB3-203ENST00000372056 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.87
LDB3-203ENST00000372056 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 A8MTW9 85 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 WIPF1O43516 503 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 RNASE3P12724 160 aaKnown RBP9.59□□□□□ -0.87
LDB3-203ENST00000372056 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 IFI27P40305 119 aaPredicted RBP9.59□□□□□ -0.87
LDB3-203ENST00000372056 CDKN1BP46527 198 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 FAM159AQ6UWV7 190 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
LDB3-203ENST00000372056 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
LDB3-203ENST00000372056 DEFB131AP59861 70 aa9.58□□□□□ -0.88
LDB3-203ENST00000372056 PHLDA3Q9Y5J5 127 aa9.58□□□□□ -0.88
LDB3-203ENST00000372056 WNK1Q9H4A3 2382 aa9.58□□□□□ -0.88
LDB3-203ENST00000372056 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 M0R381 172 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 SPINK13Q1W4C9 94 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 SPRY2O43597 315 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 NXPH4O95158 308 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 LINC00173Q6ZV60 143 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
LDB3-203ENST00000372056 AGRNO00468 2067 aa9.56□□□□□ -0.88
LDB3-203ENST00000372056 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
LDB3-203ENST00000372056 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
LDB3-203ENST00000372056 SPATA45Q537H7 98 aa9.56□□□□□ -0.88
LDB3-203ENST00000372056 H3BMM0 161 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 CRXO43186 299 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms