RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 TRAV12-1A0A0B4J245 112 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 E7EUB6 86 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 F8WEM9 126 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 ZFP2Q6ZN57 461 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 Q9H8V8 135 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 IGHV7-81A0A0B4J1V7 117 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 G3V4G9 280 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 HOXB4P17483 251 aaPredicted RBP13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 CTRLP40313 264 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 BUB3O43684 328 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 IGFBPL1Q8WX77 278 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 CRLF1O75462 422 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 IGLV2-23P01705 113 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 BAALC-AS2P0C853 105 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 TINCRA0A1B0GVN0 87 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 A0A1B0GXF2 115 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 ODF1Q14990 250 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 OBSL1O75147 1896 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 PRSS47A8MTI9 375 aa13.33□□□□□ -0.28
PTP4A1-201ENST00000370651 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 MUSTN1Q8IVN3 82 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 TMEM126AQ9H061 195 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 DKK4Q9UBT3 224 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 TRBV6-1A0A0K0K1D8 114 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 ACYP1P07311 99 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 SPATA12Q7Z6I5 190 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 TEX22C9J3V5 150 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 IGLV2-8P01709 118 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 FOXI1Q12951 378 aa13.32□□□□□ -0.28
PTP4A1-201ENST00000370651 PRAC2D3DTV9 90 aa13.31□□□□□ -0.28
PTP4A1-201ENST00000370651 CRIP3Q6Q6R5 217 aa13.31□□□□□ -0.28
PTP4A1-201ENST00000370651 CENPVL3A0A0U1RRI6 287 aa13.31□□□□□ -0.28
PTP4A1-201ENST00000370651 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
PTP4A1-201ENST00000370651 LINC01620Q4KN68 170 aa13.31□□□□□ -0.28
PTP4A1-201ENST00000370651 E9PLD3 99 aa13.3□□□□□ -0.28
PTP4A1-201ENST00000370651 RS1O15537 224 aa13.3□□□□□ -0.28
PTP4A1-201ENST00000370651 RPL32P62910 135 aaKnown RBP13.3□□□□□ -0.28
PTP4A1-201ENST00000370651 ELANEP08246 267 aa13.29□□□□□ -0.28
PTP4A1-201ENST00000370651 ALPK3Q96L96 1907 aa13.29□□□□□ -0.28
PTP4A1-201ENST00000370651 BRWD1-AS2P59051 145 aa13.29□□□□□ -0.28
PTP4A1-201ENST00000370651 IGFL2Q6UWQ7 119 aa13.29□□□□□ -0.28
PTP4A1-201ENST00000370651 MAPK1IP1LQ8NDC0 245 aa13.29□□□□□ -0.28
PTP4A1-201ENST00000370651 ZNF561-AS1K7EIQ3 104 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 BAALCQ8WXS3 180 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 PROP1O75360 226 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 CRYGCP07315 174 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 GDF5OSQ5U4N7 250 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 ICOSQ9Y6W8 199 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 TOMM6Q96B49 74 aa13.28□□□□□ -0.28
PTP4A1-201ENST00000370651 DSCR8Q96T75 97 aa13.27□□□□□ -0.28
PTP4A1-201ENST00000370651 SPANXCQ9NY87 97 aa13.27□□□□□ -0.28
PTP4A1-201ENST00000370651 IGLV1-47P01700 117 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 WT1P19544 449 aaPredicted RBP13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 LOXL1Q08397 574 aaPredicted RBP13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 C16orf54Q6UWD8 224 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 SLC25A29Q8N8R3 303 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 NCKAP5O14513 1909 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 HERV-K104P63124 156 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 U3KQE9 123 aa13.27□□□□□ -0.29
PTP4A1-201ENST00000370651 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
PTP4A1-201ENST00000370651 TNCP24821 2201 aa13.26□□□□□ -0.29
PTP4A1-201ENST00000370651 SMIM20Q8N5G0 67 aa13.26□□□□□ -0.29
PTP4A1-201ENST00000370651 C9orf47Q6ZRZ4 202 aa13.26□□□□□ -0.29
PTP4A1-201ENST00000370651 F5H768 121 aa13.26□□□□□ -0.29
PTP4A1-201ENST00000370651 DAD1P61803 113 aa13.25□□□□□ -0.29
PTP4A1-201ENST00000370651 TIMM17AQ99595 171 aa13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 C11orf86A6NJI1 115 aa13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 Q8N9W7 124 aa13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 ZNF106Q9H2Y7 1883 aaKnown RBP13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
PTP4A1-201ENST00000370651 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 ORMDL1Q9P0S3 153 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 HOXD3P31249 432 aaPredicted RBP13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 MSMPQ1L6U9 139 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 MBD6Q96DN6 1003 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 AJUBAQ96IF1 538 aa13.23□□□□□ -0.29
PTP4A1-201ENST00000370651 J3QLI3 93 aa13.22□□□□□ -0.29
PTP4A1-201ENST00000370651 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
PTP4A1-201ENST00000370651 NACAE9PAV3 2078 aa13.22□□□□□ -0.29
PTP4A1-201ENST00000370651 SPG11Q96JI7 2443 aa13.22□□□□□ -0.29
PTP4A1-201ENST00000370651 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
PTP4A1-201ENST00000370651 PIP4P1Q86T03 277 aa13.21□□□□□ -0.29
PTP4A1-201ENST00000370651 PTH2Q96A98 100 aa13.21□□□□□ -0.29
PTP4A1-201ENST00000370651 TTC28Q96AY4 2481 aa13.21□□□□□ -0.3
PTP4A1-201ENST00000370651 MED14OSP0DP75 135 aa13.21□□□□□ -0.3
PTP4A1-201ENST00000370651 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.3
PTP4A1-201ENST00000370651 KIF26AQ9ULI4 1882 aaPredicted RBP13.21□□□□□ -0.3
PTP4A1-201ENST00000370651 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms