RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 NDUFAF3Q9BU61 184 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
PRPF38B-202ENST00000370022 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 Q6ZTI0 123 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 FAM231DQ6ZW35 169 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 PHLDA1Q8WV24 401 aaPredicted RBP11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 CBY1Q9Y3M2 126 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 TRGV2A0A075B6R0 118 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 TMSB15BA0A087X1C1 80 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GAGE7O76087 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 SFTA3P0C7M3 94 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 MED14OSP0DP75 135 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 RNF212Q495C1 297 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 ZNF575Q86XF7 245 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-202ENST00000370022 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 ATP5G1P05496 136 aa11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
PRPF38B-202ENST00000370022 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 H3BVH4 76 aa11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 ARMS2P0C7Q2 107 aa11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 LBHQ53QV2 105 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
PRPF38B-202ENST00000370022 ERVFC1-1P60608 527 aa11□□□□□ -0.65
PRPF38B-202ENST00000370022 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
PRPF38B-202ENST00000370022 RPP21Q9H633 154 aaKnown RBP11□□□□□ -0.65
PRPF38B-202ENST00000370022 PHLDA3Q9Y5J5 127 aa11□□□□□ -0.65
PRPF38B-202ENST00000370022 OR5AL1P0C617 328 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 CASC10Q5T4H9 136 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 ZFAND6Q6FIF0 208 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 ISOC2Q96AB3 205 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 ADIRFQ15847 76 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 CT83Q5H943 113 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 FAM210BQ96KR6 192 aa10.99□□□□□ -0.65
PRPF38B-202ENST00000370022 A0A1W2PPQ1 181 aa10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 SNAI2O43623 268 aa10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 CIDEAO60543 219 aa10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 PNRC1Q12796 327 aaPredicted RBP10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 ZFP82Q8N141 532 aa10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 C15orf54Q8N8G6 183 aa10.98□□□□□ -0.65
PRPF38B-202ENST00000370022 TRAV4A0A0B4J268 109 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 IGLC6P0CF74 106 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 HTN3P15516 51 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 TCTAP57738 103 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 DNAH7Q8WXX0 4024 aa10.97□□□□□ -0.65
PRPF38B-202ENST00000370022 A8MWL6 223 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 A8MWV9 139 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 F2Z2F3 143 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 F5H768 121 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 RAB4AP20338 218 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 OR4C5Q8NGB2 326 aa10.96□□□□□ -0.65
PRPF38B-202ENST00000370022 GZMBP10144 247 aa10.95□□□□□ -0.66
PRPF38B-202ENST00000370022 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
PRPF38B-202ENST00000370022 SVIPQ8NHG7 77 aa10.95□□□□□ -0.66
PRPF38B-202ENST00000370022 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
PRPF38B-202ENST00000370022 M0R381 172 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 RS1O15537 224 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 NXPH4O95158 308 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 APOC3P02656 99 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 SLAQ13239 276 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 OR10G8Q8NGN5 311 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 FAM231BA6NCW3 169 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 IGLL5B9A064 214 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 HOXA5P20719 270 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 CACNG7P62955 275 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 CFAP126Q5VTH2 177 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 POM121L12Q8N7R1 296 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 OR10AG1Q8NH19 301 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 GFRA4Q9GZZ7 299 aa10.94□□□□□ -0.66
PRPF38B-202ENST00000370022 IGHV4-4A0A075B6R2 117 aa10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 FOXA3P55318 350 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 RAB5BP61020 215 aa10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 WDR73Q6P4I2 378 aa10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 ZFP2Q6ZN57 461 aa10.93□□□□□ -0.66
PRPF38B-202ENST00000370022 SVBPQ8N300 66 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms