RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
CHTOP-203ENST00000368690 RASL10AQ92737 203 aa13.28□□□□□ -0.28
CHTOP-203ENST00000368690 DCHS2Q6V1P9 2916 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 CLPSL1A2RUU4 121 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 XGP55808 180 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 FHL3Q13643 280 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 Q5PR19 223 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 C2orf66Q6UXQ4 117 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 DPH3P1Q9H4G8 78 aa13.27□□□□□ -0.28
CHTOP-203ENST00000368690 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
CHTOP-203ENST00000368690 LOC107984156A0A0G2JMH3 177 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 M0QXV9 152 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 ARL17AQ8IVW1 177 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 CARD19Q96LW7 228 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 ERG28Q9UKR5 140 aa13.27□□□□□ -0.29
CHTOP-203ENST00000368690 IGHV7-81A0A0B4J1V7 117 aa13.26□□□□□ -0.29
CHTOP-203ENST00000368690 H3BVH4 76 aa13.26□□□□□ -0.29
CHTOP-203ENST00000368690 MED14OSP0DP75 135 aa13.26□□□□□ -0.29
CHTOP-203ENST00000368690 UBTD1Q9HAC8 227 aa13.26□□□□□ -0.29
CHTOP-203ENST00000368690 IGHV1-69DA0A0B4J2H0 117 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 TMEM262E9PQX1 116 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 ZFP2Q6ZN57 461 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 HERVK_113P61574 105 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 C15orf32Q32M92 178 aa13.25□□□□□ -0.29
CHTOP-203ENST00000368690 IGHV3OR16-8A0A075B7F1 116 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 A8MWV9 139 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 ZNF688P0C7X2 276 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 RPL32P62910 135 aaKnown RBP13.24□□□□□ -0.29
CHTOP-203ENST00000368690 MINOS1Q5TGZ0 78 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 KLK15Q9H2R5 256 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 MINOS1-NBL1R4GNA1 71 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 U3KQE9 123 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 UTP20O75691 2785 aaKnown RBP13.24□□□□□ -0.29
CHTOP-203ENST00000368690 A0A0J9YY99 117 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 LY6HO94772 140 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 C1orf122Q6ZSJ8 110 aa13.24□□□□□ -0.29
CHTOP-203ENST00000368690 CLEC3BP05452 202 aa13.23□□□□□ -0.29
CHTOP-203ENST00000368690 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
CHTOP-203ENST00000368690 METTL26Q96S19 204 aa13.23□□□□□ -0.29
CHTOP-203ENST00000368690 IGHV3-35A0A0C4DH35 117 aa13.22□□□□□ -0.29
CHTOP-203ENST00000368690 TCL1BO95988 128 aa13.22□□□□□ -0.29
CHTOP-203ENST00000368690 POM121L12Q8N7R1 296 aa13.22□□□□□ -0.29
CHTOP-203ENST00000368690 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
CHTOP-203ENST00000368690 C10orf126Q8N4M7 172 aa13.22□□□□□ -0.29
CHTOP-203ENST00000368690 Q8N9W7 124 aa13.21□□□□□ -0.29
CHTOP-203ENST00000368690 PTH2Q96A98 100 aa13.21□□□□□ -0.3
CHTOP-203ENST00000368690 LINC00477Q96M19 166 aa13.21□□□□□ -0.3
CHTOP-203ENST00000368690 CHD6Q8TD26 2715 aa13.21□□□□□ -0.3
CHTOP-203ENST00000368690 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 TRAV21A0A0B4J279 112 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 IGHV3-30P01768 117 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 CRYGDP07320 174 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 IGHV3-30-5P0DP03 117 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 C9orf139Q6ZV77 190 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 RPL39LQ96EH5 51 aaKnown RBP13.2□□□□□ -0.3
CHTOP-203ENST00000368690 CCDC140Q96MF4 163 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 CFC1P0CG37 223 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 PRR9Q5T870 116 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 TIMD4Q96H15 378 aa13.2□□□□□ -0.3
CHTOP-203ENST00000368690 TRBV7-1A0A0A6YYK4 115 aa13.19□□□□□ -0.3
CHTOP-203ENST00000368690 ASIPP42127 132 aa13.19□□□□□ -0.3
CHTOP-203ENST00000368690 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
CHTOP-203ENST00000368690 UBR5O95071 2799 aaPredicted RBP13.19□□□□□ -0.3
CHTOP-203ENST00000368690 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
CHTOP-203ENST00000368690 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 C11orf86A6NJI1 115 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 ZFAND6Q6FIF0 208 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 Q6ZQT7 251 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 KLHL30-AS1Q8NEE0 82 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 RNF183Q96D59 192 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 TMEM141Q96I45 108 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 LRRK2Q5S007 2527 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 PMVKQ15126 192 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 GPHB5Q86YW7 130 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 ANKRD29Q8N6D5 301 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 ZFAND2AQ8N6M9 145 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 PRO1854Q9UHT4 67 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 PHLDA3Q9Y5J5 127 aa13.18□□□□□ -0.3
CHTOP-203ENST00000368690 CRYBG3Q68DQ2 2970 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 IGIPA6NJ69 53 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 C14orf178Q8N769 122 aaPredicted RBP13.17□□□□□ -0.3
CHTOP-203ENST00000368690 CITED1Q99966 193 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 IGHV4OR15-8A0A075B7B6 117 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 A0A087WW49 117 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 S100A4P26447 101 aaKnown RBP13.17□□□□□ -0.3
CHTOP-203ENST00000368690 CLEC19AQ6UXS0 136 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 TIMM17AQ99595 171 aa13.17□□□□□ -0.3
CHTOP-203ENST00000368690 ANAPC13Q9BS18 74 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms