RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 IGHV3-30-5P0DP03 117 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
CKS1B-202ENST00000368436 SUMO1P63165 101 aaKnown RBP10.68□□□□□ -0.7
CKS1B-202ENST00000368436 FLI1Q01543 452 aaPredicted RBP10.68□□□□□ -0.7
CKS1B-202ENST00000368436 SMUG1Q53HV7 270 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 HSD17B11Q8NBQ5 300 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 ATP6V0E2Q8NHE4 81 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 Q9HAA7 133 aa10.68□□□□□ -0.7
CKS1B-202ENST00000368436 GGTLC3B5MD39 225 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 MBP02144 154 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 ATP6V0CP27449 155 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 HAMPP81172 84 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 SERF2P84101 59 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 LAGE3Q14657 143 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 PRNTQ86SH4 94 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 TMEM167BQ9NRX6 74 aa10.67□□□□□ -0.7
CKS1B-202ENST00000368436 CXorf1O96002 111 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 ZFP69Q49AA0 526 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 SAPCD1Q5SSQ6 148 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 Q6ZSN1 163 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 CYB561D1Q8N8Q1 229 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 AQP10Q96PS8 301 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 ALG5Q9Y673 324 aa10.66□□□□□ -0.7
CKS1B-202ENST00000368436 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
CKS1B-202ENST00000368436 IGKV3D-20A0A0C4DH25 116 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 C1QBP02746 253 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 PIK3CD-AS1Q5SR53 167 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 ACTR3CQ9C0K3 210 aaPredicted RBP10.65□□□□□ -0.7
CKS1B-202ENST00000368436 PARLQ9H300 379 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 TNFSF18Q9UNG2 199 aa10.65□□□□□ -0.7
CKS1B-202ENST00000368436 MYCBP2O75592 4640 aa10.64□□□□□ -0.71
CKS1B-202ENST00000368436 A8MWV9 139 aa10.64□□□□□ -0.71
CKS1B-202ENST00000368436 TM2D2Q9BX73 214 aa10.64□□□□□ -0.71
CKS1B-202ENST00000368436 FAM30AQ9NZY2 134 aa10.64□□□□□ -0.71
CKS1B-202ENST00000368436 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
CKS1B-202ENST00000368436 A0A1W2PRE2 83 aa10.63□□□□□ -0.71
CKS1B-202ENST00000368436 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
CKS1B-202ENST00000368436 SH3BGRL3Q9H299 93 aa10.63□□□□□ -0.71
CKS1B-202ENST00000368436 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
CKS1B-202ENST00000368436 WFDC2Q14508 124 aa10.62□□□□□ -0.71
CKS1B-202ENST00000368436 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
CKS1B-202ENST00000368436 Q8N3U1 123 aa10.62□□□□□ -0.71
CKS1B-202ENST00000368436 TRAV8-3A0A0A6YYJ7 113 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
CKS1B-202ENST00000368436 GAGE1Q13065 139 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 GAGE4Q13068 117 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 GAGE5Q13069 117 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
CKS1B-202ENST00000368436 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 Q5BKY6 102 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 IL36BQ9NZH7 164 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 Q9UF83 564 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 ARL2-SNX15V9GYD0 113 aa10.61□□□□□ -0.71
CKS1B-202ENST00000368436 ASIPP42127 132 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 ZNF726P1Q15940 193 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 DNLZQ5SXM8 178 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 Q6ZSA8 131 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 OR2T35Q8NGX2 323 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 SAMD10Q9BYL1 202 aa10.6□□□□□ -0.71
CKS1B-202ENST00000368436 A0A087WWC5 75 aa10.59□□□□□ -0.71
CKS1B-202ENST00000368436 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
CKS1B-202ENST00000368436 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
CKS1B-202ENST00000368436 C14orf178Q8N769 122 aaPredicted RBP10.59□□□□□ -0.71
CKS1B-202ENST00000368436 MED28Q9H204 178 aa10.59□□□□□ -0.71
CKS1B-202ENST00000368436 JPT2Q9H910 190 aa10.59□□□□□ -0.71
CKS1B-202ENST00000368436 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
CKS1B-202ENST00000368436 CTXND1A0A1B0GTU2 59 aa10.58□□□□□ -0.72
CKS1B-202ENST00000368436 IFNA7P01567 189 aa10.58□□□□□ -0.72
CKS1B-202ENST00000368436 CRIP1P50238 77 aa10.58□□□□□ -0.72
CKS1B-202ENST00000368436 TOR2AQ5JU69 321 aa10.58□□□□□ -0.72
CKS1B-202ENST00000368436 RPL7L1Q6DKI1 246 aaKnown RBP10.58□□□□□ -0.72
CKS1B-202ENST00000368436 COX8CQ7Z4L0 72 aa10.58□□□□□ -0.72
CKS1B-202ENST00000368436 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 B4DEV8 164 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 KRBOX1C9JBD0 128 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 PEX7O00628 323 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 Q86TA4 180 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
CKS1B-202ENST00000368436 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
CKS1B-202ENST00000368436 BORCS7-ASMTA0A0B4J1R7 106 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 FAM74A7A6NL05 159 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 H3BVH4 76 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 RHODO00212 210 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 LECT2O14960 151 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 PTTG1O95997 202 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 GIPP09681 153 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-202ENST00000368436 ARMS2P0C7Q2 107 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 UBE2G2P60604 165 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 INO80EQ8NBZ0 244 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-202ENST00000368436 ZC2HC1AQ96GY0 325 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 COX11Q9Y6N1 276 aa10.56□□□□□ -0.72
CKS1B-202ENST00000368436 NIT1Q86X76 327 aa10.55□□□□□ -0.72
CKS1B-202ENST00000368436 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms