RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
LMNA-204ENST00000368298 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 CT83Q5H943 113 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 TSKUQ8WUA8 353 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
LMNA-204ENST00000368298 C8orf49Q96NF6 230 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 DKK2Q9UBU2 259 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 CELA1Q9UNI1 258 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 SPINK4O60575 86 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 SAPCD1Q5SSQ6 148 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 NDFIP1Q9BT67 221 aa13.36□□□□□ -0.27
LMNA-204ENST00000368298 A8MWL6 223 aa13.35□□□□□ -0.27
LMNA-204ENST00000368298 HTN1P15515 57 aa13.35□□□□□ -0.27
LMNA-204ENST00000368298 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
LMNA-204ENST00000368298 NAT8BQ9UHF3 227 aa13.35□□□□□ -0.27
LMNA-204ENST00000368298 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
LMNA-204ENST00000368298 HOXA5P20719 270 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 AKR1D1P51857 326 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 EMP1P54849 157 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 COX19Q49B96 90 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 MRPL54Q6P161 138 aaKnown RBP13.34□□□□□ -0.27
LMNA-204ENST00000368298 Q6ZQT7 251 aa13.34□□□□□ -0.27
LMNA-204ENST00000368298 LYRM9A8MSI8 78 aa13.33□□□□□ -0.28
LMNA-204ENST00000368298 C12orf74Q32Q52 190 aa13.33□□□□□ -0.28
LMNA-204ENST00000368298 WDR73Q6P4I2 378 aa13.33□□□□□ -0.28
LMNA-204ENST00000368298 COX8CQ7Z4L0 72 aa13.33□□□□□ -0.28
LMNA-204ENST00000368298 NUP35Q8NFH5 326 aa13.33□□□□□ -0.28
LMNA-204ENST00000368298 MRPL18Q9H0U6 180 aaKnown RBP13.33□□□□□ -0.28
LMNA-204ENST00000368298 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 SNURFLB1AK76 121 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 TDRG1Q3Y452 100 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 ZFAND6Q6FIF0 208 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 GNB1LQ9BYB4 327 aa13.32□□□□□ -0.28
LMNA-204ENST00000368298 TIMM8BQ9Y5J9 83 aaPredicted RBP13.32□□□□□ -0.28
LMNA-204ENST00000368298 TRAV21A0A0B4J279 112 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 NUPR2A6NF83 97 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 HIGD1CA8MV81 97 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 CRIP1P50238 77 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 C11orf72Q8NBR9 251 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 PHLDA1Q8WV24 401 aaPredicted RBP13.31□□□□□ -0.28
LMNA-204ENST00000368298 GFRA4Q9GZZ7 299 aa13.31□□□□□ -0.28
LMNA-204ENST00000368298 SMUG1Q53HV7 270 aa13.3□□□□□ -0.28
LMNA-204ENST00000368298 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
LMNA-204ENST00000368298 XKRY2A2RUG3 117 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 SH2D1AO60880 128 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 MT-ND6P03923 174 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 ZNF80P51504 273 aaPredicted RBP13.29□□□□□ -0.28
LMNA-204ENST00000368298 RAB4BP61018 213 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
LMNA-204ENST00000368298 FAM162BQ5T6X4 162 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 RASL11AQ6T310 242 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 Q6ZTC4 211 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 FAM231BA6NCW3 169 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 CBY3A6NI87 242 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 GZMBP10144 247 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 FAM159AQ6UWV7 190 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 ATP5L2Q7Z4Y8 100 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 GTSF1Q8WW33 167 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 PGLYRP4Q96LB8 373 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 TP53TG3Q9ULZ0 132 aa13.29□□□□□ -0.28
LMNA-204ENST00000368298 HLA-DQA1P01909 254 aa13.28□□□□□ -0.28
LMNA-204ENST00000368298 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
LMNA-204ENST00000368298 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
LMNA-204ENST00000368298 CSMD3Q7Z407 3707 aa13.28□□□□□ -0.28
LMNA-204ENST00000368298 TRAV10A0A0B4J240 114 aa13.27□□□□□ -0.29
LMNA-204ENST00000368298 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
LMNA-204ENST00000368298 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.29
LMNA-204ENST00000368298 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.29
LMNA-204ENST00000368298 A0A1B0GXF2 115 aa13.26□□□□□ -0.29
LMNA-204ENST00000368298 DAD1P61803 113 aa13.26□□□□□ -0.29
LMNA-204ENST00000368298 COA6Q5JTJ3 125 aaKnown RBP13.26□□□□□ -0.29
LMNA-204ENST00000368298 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
LMNA-204ENST00000368298 GSN-AS1Q9NRJ2 163 aa13.26□□□□□ -0.29
LMNA-204ENST00000368298 KLK5Q9Y337 293 aaPredicted RBP13.26□□□□□ -0.29
LMNA-204ENST00000368298 FABP5P3A8MUU1 101 aa13.25□□□□□ -0.29
LMNA-204ENST00000368298 C11orf21Q9P2W6 132 aa13.25□□□□□ -0.29
LMNA-204ENST00000368298 TENM2Q9NT68 2774 aa13.25□□□□□ -0.29
LMNA-204ENST00000368298 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
LMNA-204ENST00000368298 IFITM10A6NMD0 228 aa13.24□□□□□ -0.29
LMNA-204ENST00000368298 S100A8P05109 93 aa13.24□□□□□ -0.29
LMNA-204ENST00000368298 HBBP68871 147 aa13.24□□□□□ -0.29
LMNA-204ENST00000368298 PDZD11Q5EBL8 140 aa13.24□□□□□ -0.29
LMNA-204ENST00000368298 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 APCSP02743 223 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
LMNA-204ENST00000368298 TMSB15BA0A087X1C1 80 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 S100A2P29034 98 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 CAMPP49913 170 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 RPS20P60866 119 aaKnown RBP13.23□□□□□ -0.29
LMNA-204ENST00000368298 ZNF415Q09FC8 603 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 LGALS9BQ3B8N2 356 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 KIAA1644Q3SXP7 199 aa13.23□□□□□ -0.29
LMNA-204ENST00000368298 LINC00518Q8N0U6 118 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms