RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 OR4C46A6NHA9 309 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 M0R2Z0 102 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 CCL24O00175 119 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 EDN2P20800 178 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 CITED1Q99966 193 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 SCRT2Q9NQ03 307 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 WNK1Q9H4A3 2382 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 APCSP02743 223 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 CD33P20138 364 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 HLA-DMBP28068 263 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 RPL11P62913 178 aaKnown RBP9.1□□□□□ -0.95
USF1-203ENST00000368021 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 RNF182Q8N6D2 247 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
USF1-203ENST00000368021 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 PSG8Q9UQ74 426 aa9.1□□□□□ -0.95
USF1-203ENST00000368021 A0A1W2PRX2 142 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 FAM231BA6NCW3 169 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 COX8AP10176 69 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 MGST1P10620 155 aaKnown RBP9.09□□□□□ -0.95
USF1-203ENST00000368021 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 ATP5L2Q7Z4Y8 100 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 DCANP1Q8TF63 244 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 HSPB8Q9UJY1 196 aa9.09□□□□□ -0.95
USF1-203ENST00000368021 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 GAGE5Q13069 117 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 GAGE6Q13070 117 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 ADAMTSL5Q6ZMM2 481 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 Q6ZVH6 145 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 PRNTQ86SH4 94 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 NDUFA11Q86Y39 141 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 NHLRC2Q8NBF2 726 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 CMYA5Q8N3K9 4069 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
USF1-203ENST00000368021 A0A1W2PPM0 123 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 ADARB2-AS1A8MUL3 147 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
USF1-203ENST00000368021 ID1P41134 155 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 IBA57Q5T440 356 aaKnown RBP9.08□□□□□ -0.96
USF1-203ENST00000368021 COX8CQ7Z4L0 72 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 GTSF1LQ9H1H1 148 aa9.08□□□□□ -0.96
USF1-203ENST00000368021 MGAM2Q2M2H8 2515 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 CSN3P07498 182 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 SRIP30626 198 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 NSUN5P1Q3KNT7 163 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 ATP6V0E2Q8NHE4 81 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
USF1-203ENST00000368021 IZUMO1RA6ND01 250 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.06□□□□□ -0.96
USF1-203ENST00000368021 C9orf47Q6ZRZ4 202 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 C20orf173Q96LM9 149 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 VGLL1Q99990 258 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
USF1-203ENST00000368021 SPANXCQ9NY87 97 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 V9GYV3 84 aa9.06□□□□□ -0.96
USF1-203ENST00000368021 IGKV3-7A0A075B6H7 116 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 LOC102724200A0A096LPH7 203 aaPredicted RBP9.05□□□□□ -0.96
USF1-203ENST00000368021 TRAV2A0A0B4J234 112 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 K7EQG2 157 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 OVOL1O14753 267 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 NTF3P20783 257 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 PRR25Q96S07 402 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 TCTAP57738 103 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 SNRPD3P62318 126 aaKnown RBP9.05□□□□□ -0.96
USF1-203ENST00000368021 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
USF1-203ENST00000368021 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
USF1-203ENST00000368021 TMEM78Q5T7P6 136 aa9.04□□□□□ -0.96
USF1-203ENST00000368021 ZC2HC1AQ96GY0 325 aa9.04□□□□□ -0.96
USF1-203ENST00000368021 AGPAT4-IT1Q9H0P7 198 aa9.04□□□□□ -0.96
USF1-203ENST00000368021 LENEPQ9Y5L5 61 aa9.04□□□□□ -0.96
USF1-203ENST00000368021 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
USF1-203ENST00000368021 ZNF138P52744 262 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 CT83Q5H943 113 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
USF1-203ENST00000368021 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
USF1-203ENST00000368021 OR10J6PQ8NGY7 276 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 DYNLRB2Q8TF09 96 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 LINC00477Q96M19 166 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 P01737 135 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 ERCC8Q13216 396 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 OR8A1Q8NGG7 326 aa9.03□□□□□ -0.96
USF1-203ENST00000368021 Q8TAT8 98 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms