RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 RPL35P42766 123 aaKnown RBP10.15□□□□□ -0.78
SF3B5-201ENST00000367569 CRYBA4P53673 196 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 FAM162BQ5T6X4 162 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 Q6ZR54 194 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 ZFP30Q9Y2G7 519 aa10.15□□□□□ -0.78
SF3B5-201ENST00000367569 TRAV1-1A0A0B4J248 108 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 TRBV6-1A0A0K0K1D8 114 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 KRBOX1C9JBD0 128 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 CCL18P55774 89 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 ESRGQ1W209 222 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 RNF212Q495C1 297 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 CENPWQ5EE01 88 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
SF3B5-201ENST00000367569 ABCA13Q86UQ4 5058 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 BCL2P10415 239 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 GYPEP15421 78 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 BAGE2Q86Y30 109 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 JPT2Q9H910 190 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 PRO0255Q9UI72 69 aa10.13□□□□□ -0.79
SF3B5-201ENST00000367569 IFNA1P01562 189 aa10.12□□□□□ -0.79
SF3B5-201ENST00000367569 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
SF3B5-201ENST00000367569 MEF2BQ02080 365 aaPredicted RBP10.12□□□□□ -0.79
SF3B5-201ENST00000367569 ZNF674Q2M3X9 581 aa10.12□□□□□ -0.79
SF3B5-201ENST00000367569 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
SF3B5-201ENST00000367569 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
SF3B5-201ENST00000367569 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
SF3B5-201ENST00000367569 MUC21A0A0G2JKD1 596 aa10.11□□□□□ -0.79
SF3B5-201ENST00000367569 MUC21A0A140T8X8 626 aa10.11□□□□□ -0.79
SF3B5-201ENST00000367569 ARMS2P0C7Q2 107 aa10.11□□□□□ -0.79
SF3B5-201ENST00000367569 MGST1P10620 155 aaKnown RBP10.11□□□□□ -0.79
SF3B5-201ENST00000367569 LINC01559Q495D7 138 aa10.11□□□□□ -0.79
SF3B5-201ENST00000367569 H3BNG1 76 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 K7EQD1 137 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 M0R381 172 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 RS1O15537 224 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 MED9Q9NWA0 146 aa10.1□□□□□ -0.79
SF3B5-201ENST00000367569 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 S100A9P06702 114 aaKnown RBP10.09□□□□□ -0.79
SF3B5-201ENST00000367569 GATA1P15976 413 aaPredicted RBP10.09□□□□□ -0.79
SF3B5-201ENST00000367569 SRIP30626 198 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 SSTP61278 116 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 Q6ZSN1 163 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 ZNF575Q86XF7 245 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 SAMD10Q9BYL1 202 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 PARLQ9H300 379 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 VAX2Q9UIW0 290 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 MRPS16Q9Y3D3 137 aaKnown RBP10.09□□□□□ -0.79
SF3B5-201ENST00000367569 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
SF3B5-201ENST00000367569 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 IGLV2-8P01709 118 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 GZMBP10144 247 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 GNG4P50150 75 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 CEBPGP53567 150 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
SF3B5-201ENST00000367569 HSPG2P98160 4391 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 A0A087WWL8 130 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 PDE6DO43924 150 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 NXPH4O95158 308 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
SF3B5-201ENST00000367569 TOR2AQ5JU69 321 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 SLC25A29Q8N8R3 303 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
SF3B5-201ENST00000367569 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
SF3B5-201ENST00000367569 BLOC1S1P78537 153 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 SLAQ13239 276 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 SOHLH1Q5JUK2 328 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 Q9H8V8 135 aa10.06□□□□□ -0.8
SF3B5-201ENST00000367569 DNLZQ5SXM8 178 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 LYPD5Q6UWN5 251 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
SF3B5-201ENST00000367569 SYT8Q8NBV8 401 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 TXNDC17Q9BRA2 123 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 TPPP3Q9BW30 176 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 Q9UF83 564 aa10.05□□□□□ -0.8
SF3B5-201ENST00000367569 RBFOX3A6NFN3 312 aa10.04□□□□□ -0.8
SF3B5-201ENST00000367569 RHOHQ15669 191 aa10.04□□□□□ -0.8
SF3B5-201ENST00000367569 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
SF3B5-201ENST00000367569 SCRT2Q9NQ03 307 aa10.04□□□□□ -0.8
SF3B5-201ENST00000367569 GAGE12JA6NER3 117 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 A8MWV9 139 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 GAGE1Q13065 139 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 GAGE4Q13068 117 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 GAGE5Q13069 117 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 GAGE13Q4V321 117 aa10.03□□□□□ -0.8
SF3B5-201ENST00000367569 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms