RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CD5LO43866 347 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 LINC00574Q9H8X3 128 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 PRR14LQ5THK1 2151 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 EDA2RQ9HAV5 297 aa8.98□□□□□ -0.97
SYNE1-204ENST00000367248 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-204ENST00000367248 DSCAMO60469 2012 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 WDR87Q6ZQQ6 2873 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 K7EMT4 169 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 ATP5G1P05496 136 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 hDV102S1A0JD36 115 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 FSTL3O95633 263 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 TNRC6AQ8NDV7 1962 aaKnown RBP8.97□□□□□ -0.97
SYNE1-204ENST00000367248 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
SYNE1-204ENST00000367248 SLAQ13239 276 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-204ENST00000367248 SMIM27A0A1W2PRY6 76 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 C2orf70A6NJV1 201 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 CHAC1Q9BUX1 264 aa8.97□□□□□ -0.97
SYNE1-204ENST00000367248 IGLV2-14P01704 120 aa8.96□□□□□ -0.97
SYNE1-204ENST00000367248 NPYP01303 97 aa8.96□□□□□ -0.97
SYNE1-204ENST00000367248 MYO9AB2RTY4 2548 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 GPHB5Q86YW7 130 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 PCDH15Q96QU1 1955 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 MORN5Q5VZ52 161 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.98
SYNE1-204ENST00000367248 ERG28Q9UKR5 140 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 ADAMTSL5Q6ZMM2 481 aa8.96□□□□□ -0.98
SYNE1-204ENST00000367248 RHOHQ15669 191 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 COL4A4P53420 1690 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-204ENST00000367248 E7EUB6 86 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 EGR2P11161 476 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-204ENST00000367248 EML6Q6ZMW3 1958 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
SYNE1-204ENST00000367248 PYY3Q5JQD4 70 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 CFHR4Q92496 578 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 ICOSQ9Y6W8 199 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 FANCD2OSQ96PS1 177 aa8.95□□□□□ -0.98
SYNE1-204ENST00000367248 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-204ENST00000367248 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
SYNE1-204ENST00000367248 RNF183Q96D59 192 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 SIGLEC8Q9NYZ4 499 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 WI2-2373I1.2A0A1W2PRP0 233 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 LINC01548A6NM66 108 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 LINC00482Q8N8I6 264 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 C4orf3Q8WVX3 66 aa8.94□□□□□ -0.98
SYNE1-204ENST00000367248 LEPROTO15243 131 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 NCKAP5O14513 1909 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 NAA38Q9BRA0 125 aaKnown RBP8.93□□□□□ -0.98
SYNE1-204ENST00000367248 RNF152Q8N8N0 203 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 CDSNQ15517 529 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 GAGE2EQ4V326 116 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 GAGE2DQ9UEU5 116 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 TRAV25A0A0B4J276 109 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 K7EN84 100 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 UTF1Q5T230 341 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 ZFAND6Q6FIF0 208 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 TMEM61Q8N0U2 210 aa8.93□□□□□ -0.98
SYNE1-204ENST00000367248 MRPL23Q16540 153 aaKnown RBP8.92□□□□□ -0.98
SYNE1-204ENST00000367248 C10orf91Q5T1B1 145 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 CRIP3Q6Q6R5 217 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 IGHV1-24A0A0C4DH33 117 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 C11orf71Q6IPW1 123 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 SHISA2Q6UWI4 295 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 STPG4Q8N801 248 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 FAM167A-AS1Q96KT0 104 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 ZNF48Q96MX3 618 aaPredicted RBP8.92□□□□□ -0.98
SYNE1-204ENST00000367248 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 P0C879 139 aa8.92□□□□□ -0.98
SYNE1-204ENST00000367248 DENND4AQ7Z401 1863 aa8.91□□□□□ -0.98
SYNE1-204ENST00000367248 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
SYNE1-204ENST00000367248 Q6ZPA2 131 aa8.91□□□□□ -0.98
SYNE1-204ENST00000367248 ESDP10768 282 aa8.91□□□□□ -0.98
SYNE1-204ENST00000367248 C16orf74Q96GX8 76 aa8.91□□□□□ -0.98
SYNE1-204ENST00000367248 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 MPV17L2Q567V2 206 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 C10orf99Q6UWK7 81 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 UNQ9165/PRO28630Q6UXU0 137 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 PRAC2D3DTV9 90 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 SNHG12Q9BXW3 62 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 MEGF9Q9H1U4 602 aa8.9□□□□□ -0.98
SYNE1-204ENST00000367248 RPL32P62910 135 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms