RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 SH2D1AO60880 128 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 LTAP01374 205 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 GYPEP15421 78 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 FHL2Q14192 279 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 RHOHQ15669 191 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 ZNF506Q5JVG8 444 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 Q6ZR54 194 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 C9orf85Q96MD7 179 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 PRADC1Q9BSG0 188 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 Q9H8V8 135 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
MRPL55-216ENST00000366744 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 A0A1W2PPQ1 181 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 A8MWV9 139 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 RHODO00212 210 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 NXPH4O95158 308 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 MGST1P10620 155 aaKnown RBP6.46□□□□□ -1.38
MRPL55-216ENST00000366744 TAGLN2P37802 199 aaKnown RBP6.46□□□□□ -1.38
MRPL55-216ENST00000366744 SULT1A2P50226 295 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 ESRGQ1W209 222 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 C11orf21Q9P2W6 132 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 PHLDA3Q9Y5J5 127 aa6.46□□□□□ -1.38
MRPL55-216ENST00000366744 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 TMSB15BA0A087X1C1 80 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 K7EQD1 137 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 SIVA1O15304 175 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 PDE6DO43924 150 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
MRPL55-216ENST00000366744 LINC01559Q495D7 138 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 PIK3CD-AS1Q5SR53 167 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 CFAP126Q5VTH2 177 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 PRR27Q6MZM9 219 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 BAGE2Q86Y30 109 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 PTH2Q96A98 100 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 BOLA1Q9Y3E2 137 aa6.45□□□□□ -1.38
MRPL55-216ENST00000366744 TRAV9-2A0A087WT02 112 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 IGHV3-73A0A0B4J1V6 119 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 KRBOX1C9JBD0 128 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 RS1O15537 224 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 BCL2P10415 239 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 RNASE3P12724 160 aaKnown RBP6.44□□□□□ -1.38
MRPL55-216ENST00000366744 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
MRPL55-216ENST00000366744 RPL35P42766 123 aaKnown RBP6.44□□□□□ -1.38
MRPL55-216ENST00000366744 GNG4P50150 75 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 ZNF674Q2M3X9 581 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 COX8CQ7Z4L0 72 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 C9orf62Q8N4C0 152 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
MRPL55-216ENST00000366744 GRIFINA4D1Z8 144 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 M0R381 172 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 RTL8CO15255 209 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 ARMS2P0C7Q2 107 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
MRPL55-216ENST00000366744 EVI2AP22794 236 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 CENPWQ5EE01 88 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 FAM74A4Q5TZK3 123 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 C11orf52Q96A22 123 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
MRPL55-216ENST00000366744 SMIM12Q96EX1 92 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 PARLQ9H300 379 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 BIN3Q9NQY0 253 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 VAX2Q9UIW0 290 aa6.43□□□□□ -1.38
MRPL55-216ENST00000366744 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 XKRY2A2RUG3 117 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 K7EP13 123 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 CXCL1P09341 107 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 MED14OSP0DP75 135 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 NKX2-5P52952 324 aaPredicted RBP6.42□□□□□ -1.38
MRPL55-216ENST00000366744 CTAG1AP78358 180 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 BLOC1S1P78537 153 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 ALKAL2Q6UX46 152 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 SLC25A29Q8N8R3 303 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 MED9Q9NWA0 146 aa6.42□□□□□ -1.38
MRPL55-216ENST00000366744 CRIP1P50238 77 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 RPS20P60866 119 aaKnown RBP6.41□□□□□ -1.38
MRPL55-216ENST00000366744 CCL20P78556 96 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 OR10J3Q5JRS4 329 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 SPANXN1Q5VSR9 72 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
MRPL55-216ENST00000366744 DERL1Q9BUN8 251 aa6.41□□□□□ -1.38
MRPL55-216ENST00000366744 LOC100131303A0A0U1RQF7 123 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 P01737 135 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 SMIM17P0DL12 118 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 TIRAPP58753 221 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 ZNF56Q15929 161 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
MRPL55-216ENST00000366744 AP1S3Q96PC3 154 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 552.8 ms