RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 DLX6P56179 175 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 I3L2K1 104 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 PRSS2P07478 247 aa9.82□□□□□ -0.84
VAMP1-201ENST00000361716 SHISA9B4DS77 424 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 C15orf53Q8NAA6 179 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 C14orf178Q8N769 122 aaPredicted RBP9.81□□□□□ -0.84
VAMP1-201ENST00000361716 RPL39LQ96EH5 51 aaKnown RBP9.81□□□□□ -0.84
VAMP1-201ENST00000361716 CITED1Q99966 193 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 UTP20O75691 2785 aaKnown RBP9.81□□□□□ -0.84
VAMP1-201ENST00000361716 RAI1Q7Z5J4 1906 aaPredicted RBP9.81□□□□□ -0.84
VAMP1-201ENST00000361716 K7EIM0 57 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 NBR2O15453 112 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 NPC2P61916 151 aa9.81□□□□□ -0.84
VAMP1-201ENST00000361716 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 DEFB1P60022 68 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 LYPD1Q8N2G4 141 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
VAMP1-201ENST00000361716 F5H697 171 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 CLEC19AQ6UXS0 136 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 FAM57AQ8TBR7 257 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 FLNCQ14315 2725 aa9.8□□□□□ -0.84
VAMP1-201ENST00000361716 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 IGLC6P0CF74 106 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 GRNP28799 593 aaKnown RBP9.79□□□□□ -0.84
VAMP1-201ENST00000361716 HERVK_113P61574 105 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 GATD1Q8NB37 220 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 DPM3Q9P2X0 92 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 HOXB4P17483 251 aaPredicted RBP9.79□□□□□ -0.84
VAMP1-201ENST00000361716 ZNF56Q15929 161 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 Q6ZS46 218 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 NDUFA11Q86Y39 141 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 CFAP46Q8IYW2 2715 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 CRYBG3Q68DQ2 2970 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 THBDP07204 575 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 PVRIGQ6DKI7 326 aa9.79□□□□□ -0.84
VAMP1-201ENST00000361716 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
VAMP1-201ENST00000361716 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
VAMP1-201ENST00000361716 ID1P41134 155 aa9.78□□□□□ -0.84
VAMP1-201ENST00000361716 CUBNO60494 3623 aa9.78□□□□□ -0.84
VAMP1-201ENST00000361716 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
VAMP1-201ENST00000361716 CHCHD5Q9BSY4 110 aa9.78□□□□□ -0.84
VAMP1-201ENST00000361716 MRGPRG-AS1Q2M3A8 158 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 ADARB2-AS1A8MUL3 147 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 LGALS3P17931 250 aaKnown RBP9.77□□□□□ -0.85
VAMP1-201ENST00000361716 SRD5A1P18405 259 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 POLQO75417 2590 aa9.77□□□□□ -0.85
VAMP1-201ENST00000361716 USP9XQ93008 2570 aaPredicted RBP9.77□□□□□ -0.85
VAMP1-201ENST00000361716 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
VAMP1-201ENST00000361716 TIMD4Q96H15 378 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 VCX2Q9H322 139 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 DUSP14O95147 198 aaKnown RBP9.76□□□□□ -0.85
VAMP1-201ENST00000361716 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 CFC1P0CG37 223 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 UBTD1Q9HAC8 227 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 DCHS2Q6V1P9 2916 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 CEACAM4O75871 244 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 IGKV3-20P01619 116 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 C15orf32Q32M92 178 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 Q8N1Y9 231 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 PHLDA3Q9Y5J5 127 aa9.76□□□□□ -0.85
VAMP1-201ENST00000361716 A4D1N5 150 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 RHODO00212 210 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 HTN1P15515 57 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 ZNF672Q499Z4 452 aaPredicted RBP9.75□□□□□ -0.85
VAMP1-201ENST00000361716 BAALCQ8WXS3 180 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 LRRK2Q5S007 2527 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 G3V318 75 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
VAMP1-201ENST00000361716 TRBV6-1A0A0K0K1D8 114 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 Q6ZS92 163 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 C10orf126Q8N4M7 172 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 NUP37Q8NFH4 326 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 RASL10AQ92737 203 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
VAMP1-201ENST00000361716 PDE6HQ13956 83 aa9.74□□□□□ -0.85
VAMP1-201ENST00000361716 ORMDL2Q53FV1 153 aa9.74□□□□□ -0.85
VAMP1-201ENST00000361716 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
VAMP1-201ENST00000361716 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
VAMP1-201ENST00000361716 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
VAMP1-201ENST00000361716 IGSF10Q6WRI0 2623 aa9.74□□□□□ -0.85
VAMP1-201ENST00000361716 CCL21O00585 134 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 TMEM95Q3KNT9 176 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 LINC00311Q8N616 119 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 NRACQ8N912 160 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 AGPAT4-IT1Q9H0P7 198 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 RAB1BQ9H0U4 201 aa9.73□□□□□ -0.85
VAMP1-201ENST00000361716 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms