RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 RPH3ALQ9UNE2 315 aa9.04□□□□□ -0.96
VPS29-201ENST00000360579 PGPA6NDG6 321 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 IL7P13232 177 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 C14orf177Q52M58 125 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 ZFP2Q6ZN57 461 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 CYB561D1Q8N8Q1 229 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 OR10G9Q8NGN4 311 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 SEC22CQ9BRL7 303 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 NDFIP1Q9BT67 221 aa9.03□□□□□ -0.96
VPS29-201ENST00000360579 TRAV6A0A075B6T7 132 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 GAGE12JA6NER3 117 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 TAAR5O14804 337 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 TCRBP04435 133 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 LINC00694P0DN24 101 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
VPS29-201ENST00000360579 GAGE1Q13065 139 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 GAGE4Q13068 117 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 GAGE5Q13069 117 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 GAGE13Q4V321 117 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 C9orf85Q96MD7 179 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 SDHCQ99643 169 aaPredicted RBP9.02□□□□□ -0.97
VPS29-201ENST00000360579 MBD2Q9UBB5 411 aa9.02□□□□□ -0.97
VPS29-201ENST00000360579 A8MWV9 139 aa9.01□□□□□ -0.97
VPS29-201ENST00000360579 LYRM1O43325 122 aa9.01□□□□□ -0.97
VPS29-201ENST00000360579 ELOBQ15370 118 aa9.01□□□□□ -0.97
VPS29-201ENST00000360579 NUDT15Q9NV35 164 aa9.01□□□□□ -0.97
VPS29-201ENST00000360579 LRP2P98164 4655 aa9□□□□□ -0.97
VPS29-201ENST00000360579 SERTM2A0A1B0GWG4 89 aa9□□□□□ -0.97
VPS29-201ENST00000360579 PGPEP1LA6NFU8 196 aa9□□□□□ -0.97
VPS29-201ENST00000360579 FFAR4Q5NUL3 377 aa9□□□□□ -0.97
VPS29-201ENST00000360579 PIK3CD-AS1Q5SR53 167 aa9□□□□□ -0.97
VPS29-201ENST00000360579 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
VPS29-201ENST00000360579 CHCHD7Q9BUK0 85 aa9□□□□□ -0.97
VPS29-201ENST00000360579 A6NHS1 94 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 PLA2G10O15496 165 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 PQLC2Q6ZP29 291 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 NIT1Q86X76 327 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 UBE2WQ96B02 151 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 DAZAP1Q96EP5 407 aaKnown RBP8.99□□□□□ -0.97
VPS29-201ENST00000360579 PARLQ9H300 379 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 KLK12Q9UKR0 248 aa8.99□□□□□ -0.97
VPS29-201ENST00000360579 TNXBP22105 4242 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 A0A087WX48 190 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 Q0VG73 95 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 ZFP69Q49AA0 526 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 ATRAIDQ6UW56 229 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 OR5AC2Q9NZP5 309 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 C11orf21Q9P2W6 132 aa8.98□□□□□ -0.97
VPS29-201ENST00000360579 K7EQM0 130 aa8.97□□□□□ -0.97
VPS29-201ENST00000360579 GCGP01275 180 aa8.97□□□□□ -0.97
VPS29-201ENST00000360579 RNASE3P12724 160 aaKnown RBP8.97□□□□□ -0.97
VPS29-201ENST00000360579 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
VPS29-201ENST00000360579 Q6ZRU5 148 aa8.97□□□□□ -0.97
VPS29-201ENST00000360579 OR2T35Q8NGX2 323 aa8.97□□□□□ -0.97
VPS29-201ENST00000360579 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
VPS29-201ENST00000360579 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
VPS29-201ENST00000360579 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
VPS29-201ENST00000360579 GNG5P63218 68 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
VPS29-201ENST00000360579 SMUG1Q53HV7 270 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 SCGB1C1Q8TD33 95 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 DNAJC30Q96LL9 226 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 C1orf43Q9BWL3 253 aa8.96□□□□□ -0.98
VPS29-201ENST00000360579 A0A1W2PPV4 95 aa8.95□□□□□ -0.98
VPS29-201ENST00000360579 RHODO00212 210 aa8.95□□□□□ -0.98
VPS29-201ENST00000360579 TMEM75Q8N9X5 138 aa8.95□□□□□ -0.98
VPS29-201ENST00000360579 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
VPS29-201ENST00000360579 SAMD10Q9BYL1 202 aa8.95□□□□□ -0.98
VPS29-201ENST00000360579 TCRAP04437 139 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 CYCSP99999 105 aaKnown RBP8.94□□□□□ -0.98
VPS29-201ENST00000360579 LRRC37A5PQ49AS3 106 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 UFSP1Q6NVU6 142 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 C14orf178Q8N769 122 aaPredicted RBP8.94□□□□□ -0.98
VPS29-201ENST00000360579 C5orf17Q8NAS9 161 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
VPS29-201ENST00000360579 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
VPS29-201ENST00000360579 A0A0D9SG52 128 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 EIF3GO75821 320 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS29-201ENST00000360579 CRPP02741 224 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 ASIPP42127 132 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 SAPCD1Q5SSQ6 148 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 OR10G7Q8NGN6 311 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 OR2G3Q8NGZ4 309 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 Q9UF83 564 aa8.93□□□□□ -0.98
VPS29-201ENST00000360579 FAM240BA0A1B0GVZ2 78 aa8.92□□□□□ -0.98
VPS29-201ENST00000360579 H0YIZ8 118 aa8.92□□□□□ -0.98
VPS29-201ENST00000360579 FLI1Q01543 452 aaPredicted RBP8.92□□□□□ -0.98
VPS29-201ENST00000360579 USP17L23D6RBM5 183 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 SIX6O95475 246 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 PRNTQ86SH4 94 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 HSD17B11Q8NBQ5 300 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 ZC2HC1AQ96GY0 325 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 IL36BQ9NZH7 164 aa8.91□□□□□ -0.98
VPS29-201ENST00000360579 HSPB11Q9Y547 144 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms