RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 LOC100131303A0A0U1RQF7 123 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 SMIM9A6NGZ8 99 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 CXorf67Q86X51 503 aaPredicted RBP3.35□□□□□ -1.87
PTPN22-201ENST00000359785 KLK15Q9H2R5 256 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 DYNLRB1Q9NP97 96 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 DNAH12Q6ZR08 3092 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 NDUFC2O95298 119 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 RNASE3P12724 160 aaKnown RBP3.35□□□□□ -1.87
PTPN22-201ENST00000359785 Q5XG85 94 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 ZNRF1Q8ND25 227 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 UBALD1Q8TB05 177 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 COX7A2LO14548 114 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 VCYO14598 125 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 CFHR3Q02985 330 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 IGFL4Q6B9Z1 124 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 DEFB124Q8NES8 71 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
PTPN22-201ENST00000359785 IGHV3OR16-10A0A075B7F0 116 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 J3QQQ9 107 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 CD24P25063 80 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.87
PTPN22-201ENST00000359785 DYNAPQ8N1N2 210 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV21A0A0B4J279 112 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 ZNF815PA8K554 130 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 F8WDY8 70 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 IGF1P05019 195 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 ARL3P36405 182 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 FABP6P51161 128 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 EFNA4P52798 201 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 HERV-K104P63124 156 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 TMEM108Q6UXF1 575 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 SMIM20Q8N5G0 67 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 FAM215AQ9Y5M1 114 aa3.34□□□□□ -1.87
PTPN22-201ENST00000359785 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 LCE6AA0A183 80 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 DEFB108AA8MXU0 73 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 TRIAP1O43715 76 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 INAFM2P0DMQ5 153 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 SPINK14Q6IE38 97 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 VKORC1Q9BQB6 163 aa3.34□□□□□ -1.88
PTPN22-201ENST00000359785 NDUFA4O00483 81 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 TRGV3P03979 118 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 Q96MF0 132 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 IGHV4-59P01825 116 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 IGHV4-38-2P0DP08 117 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 CCL8P80075 99 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 C11orf71Q6IPW1 123 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 SS18L2Q9UHA2 77 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 KLRB1Q12918 225 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 FAM159AQ6UWV7 190 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 C20orf203Q8NBC4 194 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 KIR2DL5BQ8NHK3 375 aa3.33□□□□□ -1.88
PTPN22-201ENST00000359785 NDUFB3O43676 98 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 LINC00694P0DN24 101 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 TRPT1Q86TN4 253 aaKnown RBP3.32□□□□□ -1.88
PTPN22-201ENST00000359785 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 M0QY20 66 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
PTPN22-201ENST00000359785 Q6ZS46 218 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 PRIMA1Q86XR5 153 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 OR13C6PQ8NH95 151 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 ZNF625Q96I27 306 aaPredicted RBP3.32□□□□□ -1.88
PTPN22-201ENST00000359785 CCDC140Q96MF4 163 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 FREM1Q5H8C1 2179 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 B9A039 149 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 LYZP61626 148 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 ANXA2RQ3ZCQ2 193 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 Q8NA96 180 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 BPESC1Q9GZL8 116 aa3.32□□□□□ -1.88
PTPN22-201ENST00000359785 MYO7AQ13402 2215 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 A4D1N5 150 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 B5MCH6 92 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 PRSS1P07477 247 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 FOXC1Q12948 553 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 TTC32Q5I0X7 151 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 C10orf55Q5SWW7 151 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 C9orf66Q5T8R8 295 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 DPH3Q96FX2 82 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 SIRPDQ9H106 197 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 LOC110117498A0A087WWA1 95 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 A0A1B0GW54 56 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 NPFFO15130 113 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 PSMB2P49721 201 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 FDCSPQ8NFU4 85 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 AGRNO00468 2067 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 IGHV7-81A0A0B4J1V7 117 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 CD3EP07766 207 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 DEFB114Q30KQ6 69 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 MEIG1Q5JSS6 88 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 PRR9Q5T870 116 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 Q8N9W7 124 aa3.31□□□□□ -1.88
PTPN22-201ENST00000359785 MCRIP2Q9BUT9 160 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms