RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 S4R3C0 116 aa11.46□□□□□ -0.57
UBAP1-202ENST00000359544 IGKV3D-20A0A0C4DH25 116 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 B5MCH6 92 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 M0QXV9 152 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 HLA-DMBP28068 263 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 SLC50A1Q9BRV3 221 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 SMAD5-AS1Q9Y6J3 95 aa11.46□□□□□ -0.58
UBAP1-202ENST00000359544 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 H3BVH4 76 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 ERCC8Q13216 396 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 ADIPOQQ15848 244 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 RNASE6Q93091 150 aaKnown RBP11.45□□□□□ -0.58
UBAP1-202ENST00000359544 AKAP6Q13023 2319 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 MAP1AP78559 2803 aaPredicted RBP11.45□□□□□ -0.58
UBAP1-202ENST00000359544 RHODO00212 210 aa11.45□□□□□ -0.58
UBAP1-202ENST00000359544 IGLV11-55A0A075B6I3 123 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 NRGNQ92686 78 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 C21orf62Q9NYP8 219 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 IGHV7-4-1A0A0J9YVY3 117 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 IGFBPL1Q8WX77 278 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
UBAP1-202ENST00000359544 NBR2O15453 112 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 SNCGO76070 127 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 KLK15Q9H2R5 256 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
UBAP1-202ENST00000359544 HERVK_113P61574 105 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 FANCD2OSQ96PS1 177 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 KIR2DL4Q99706 377 aa11.43□□□□□ -0.58
UBAP1-202ENST00000359544 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
UBAP1-202ENST00000359544 SPANXA1Q9NS26 97 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE12JA6NER3 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 LINC01548A6NM66 108 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE7O76087 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE12FP0CL80 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE12GP0CL81 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE12IP0CL82 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 COX7A1P24310 79 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 DLX1P56177 255 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 NDUFV3P56181 108 aaKnown RBP11.42□□□□□ -0.58
UBAP1-202ENST00000359544 GAGE4Q13068 117 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 FBXL19-AS1Q494R0 122 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 ABCA4P78363 2273 aa11.42□□□□□ -0.58
UBAP1-202ENST00000359544 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
UBAP1-202ENST00000359544 PAPPA-AS1Q5QFB9 102 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 RASL10AQ92737 203 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 C11orf21Q9P2W6 132 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 MALRD1Q5VYJ5 2156 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 PDZD2O15018 2839 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 VPS13CQ709C8 3753 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 TIMM23O14925 209 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 SLC25A20O43772 301 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 Q6Q795 121 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
UBAP1-202ENST00000359544 A0A0J9YY99 117 aa11.4□□□□□ -0.58
UBAP1-202ENST00000359544 LY6LH3BQJ8 138 aa11.4□□□□□ -0.58
UBAP1-202ENST00000359544 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 CFC1BP0CG36 223 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 CFC1P0CG37 223 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 PRB3Q04118 309 aaPredicted RBP11.4□□□□□ -0.59
UBAP1-202ENST00000359544 TTC32Q5I0X7 151 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 NPBQ8NG41 125 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.59
UBAP1-202ENST00000359544 ROS1P08922 2347 aa11.39□□□□□ -0.59
UBAP1-202ENST00000359544 IFITM1P13164 125 aa11.39□□□□□ -0.59
UBAP1-202ENST00000359544 AJUBAQ96IF1 538 aa11.39□□□□□ -0.59
UBAP1-202ENST00000359544 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
UBAP1-202ENST00000359544 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
UBAP1-202ENST00000359544 ABCA1O95477 2261 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 TMEM95Q3KNT9 176 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
UBAP1-202ENST00000359544 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 IGHV3-23P01764 117 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 CTSGP08311 255 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 PRTN3P24158 256 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 RNF182Q8N6D2 247 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 CCDC168Q8NDH2 2452 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 C9JAW5 83 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 TGFAP01135 160 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
UBAP1-202ENST00000359544 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms