RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PRSS47A8MTI9 375 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 MGPP08493 103 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 RNASE3P12724 160 aaKnown RBP11.88□□□□□ -0.51
PHTF1-201ENST00000357783 SYNJ2BPP57105 145 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 NMUP48645 174 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 KLLNB2CW77 178 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 Q6YL49 198 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 ERASQ7Z444 233 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 DEFB125Q8N687 156 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
PHTF1-201ENST00000357783 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
PHTF1-201ENST00000357783 AGRNO00468 2067 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
PHTF1-201ENST00000357783 FSHBP01225 129 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 RASL10AQ92737 203 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 SORL1Q92673 2214 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 IGHV4OR15-8A0A075B7B6 117 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 A0A087WW49 117 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 IGKV3-20P01619 116 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 MED14OSP0DP75 135 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 OCIAD2Q56VL3 154 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 Q5PR19 223 aa11.87□□□□□ -0.51
PHTF1-201ENST00000357783 TRAV12-3A0A0B4J271 114 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 SAMD13Q5VXD3 122 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
PHTF1-201ENST00000357783 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
PHTF1-201ENST00000357783 C7orf71A4D174 169 aa11.85□□□□□ -0.51
PHTF1-201ENST00000357783 ATP5LO75964 103 aa11.85□□□□□ -0.51
PHTF1-201ENST00000357783 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
PHTF1-201ENST00000357783 MYOZ3Q8TDC0 251 aa11.85□□□□□ -0.51
PHTF1-201ENST00000357783 VPS25Q9BRG1 176 aa11.85□□□□□ -0.51
PHTF1-201ENST00000357783 DEFB113Q30KQ7 82 aa11.84□□□□□ -0.51
PHTF1-201ENST00000357783 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
PHTF1-201ENST00000357783 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
PHTF1-201ENST00000357783 IGKCP01834 107 aa11.84□□□□□ -0.51
PHTF1-201ENST00000357783 ELANEP08246 267 aa11.84□□□□□ -0.51
PHTF1-201ENST00000357783 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
PHTF1-201ENST00000357783 SNRPD3P62318 126 aaKnown RBP11.84□□□□□ -0.51
PHTF1-201ENST00000357783 PRRC2AP48634 2157 aaKnown RBP11.84□□□□□ -0.51
PHTF1-201ENST00000357783 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 CBY3A6NI87 242 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 CD7P09564 240 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 K7EQG2 157 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 DPM2O94777 84 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 Q96MF0 132 aa11.83□□□□□ -0.52
PHTF1-201ENST00000357783 MYO9AB2RTY4 2548 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 IGKV2D-26A0A0A0MRZ7 120 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 A0A0J9YX75 114 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 JPT2Q9H910 190 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
PHTF1-201ENST00000357783 MRPL35Q9NZE8 188 aaKnown RBP11.82□□□□□ -0.52
PHTF1-201ENST00000357783 NXPH4O95158 308 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 GTSCR1Q86UQ5 136 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 OR9G4Q8NGQ1 327 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 C18orf65Q6ZTR6 163 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
PHTF1-201ENST00000357783 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 APCP25054 2843 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 LGALS9O00182 355 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 ZC2HC1BQ5TFG8 222 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 A0A087WWL8 130 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
PHTF1-201ENST00000357783 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 CSTL1Q9H114 145 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
PHTF1-201ENST00000357783 LINC00315P59091 139 aa11.79□□□□□ -0.52
PHTF1-201ENST00000357783 SCGB3A1Q96QR1 104 aa11.79□□□□□ -0.52
PHTF1-201ENST00000357783 A0A087WX48 190 aa11.79□□□□□ -0.52
PHTF1-201ENST00000357783 SLURP1P55000 103 aa11.79□□□□□ -0.52
PHTF1-201ENST00000357783 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
PHTF1-201ENST00000357783 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 SEC11AP67812 179 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 HSD52Q0P140 79 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 SIVA1O15304 175 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 DEFB104AQ8WTQ1 72 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 MDFICQ9P1T7 246 aa11.78□□□□□ -0.52
PHTF1-201ENST00000357783 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
PHTF1-201ENST00000357783 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.52
PHTF1-201ENST00000357783 LRRC75A-AS1Q8N1F1 130 aa11.77□□□□□ -0.52
PHTF1-201ENST00000357783 RNF152Q8N8N0 203 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms