RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 HIVEP3Q5T1R4 2406 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 IGHV1-69DA0A0B4J2H0 117 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 RBAKDNA6NC62 111 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 MRPS12O15235 138 aaKnown RBP5.25□□□□□ -1.57
RTN4-203ENST00000357376 IGHV1-69P01742 117 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 NPC2P61916 151 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 WFDC2Q14508 124 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 SPINK13Q1W4C9 94 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 TMEM95Q3KNT9 176 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 Q5PR19 223 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 MAPK1IP1LQ8NDC0 245 aa5.25□□□□□ -1.57
RTN4-203ENST00000357376 SETD2Q9BYW2 2564 aaPredicted RBP5.24□□□□□ -1.57
RTN4-203ENST00000357376 TLN2Q9Y4G6 2542 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 BLCAPP62952 87 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 PAPPA-AS1Q5QFB9 102 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 ZNF48Q96MX3 618 aaPredicted RBP5.24□□□□□ -1.57
RTN4-203ENST00000357376 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 PTPRBP23467 1997 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 NACAE9PAV3 2078 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 IGLL5B9A064 214 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 VCYO14598 125 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 FGF6P10767 208 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 DLX4Q92988 240 aaPredicted RBP5.24□□□□□ -1.57
RTN4-203ENST00000357376 DUX3Q96PT4 197 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 TNFRSF18Q9Y5U5 241 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 DUSP14O95147 198 aaKnown RBP5.24□□□□□ -1.57
RTN4-203ENST00000357376 IGHV4-39P01824 125 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 PIP4P2Q8N4L2 257 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 USMG5Q96IX5 58 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 SIRPDQ9H106 197 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 U3KQK5 164 aa5.24□□□□□ -1.57
RTN4-203ENST00000357376 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 A0A1B0GV72 72 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 KNCNA6PVL3 124 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 NDUFA4O00483 81 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 CD28P10747 220 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 SYNJ2BPP57105 145 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 C5orf56Q8N8D9 126 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
RTN4-203ENST00000357376 ASPMQ8IZT6 3477 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 USP9XQ93008 2570 aaPredicted RBP5.23□□□□□ -1.57
RTN4-203ENST00000357376 F8W735 103 aaPredicted RBP5.23□□□□□ -1.57
RTN4-203ENST00000357376 NDUFS8O00217 210 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 IGHV4-38-2P0DP08 117 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 NBL1P41271 181 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 ZFAND3Q9H8U3 227 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 JPT2Q9H910 190 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 RPL39P62891 51 aaKnown RBP5.23□□□□□ -1.57
RTN4-203ENST00000357376 MAPKAPK5-AS1Q8N8E1 139 aa5.23□□□□□ -1.57
RTN4-203ENST00000357376 CCDC168Q8NDH2 2452 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 DMXL2Q8TDJ6 3036 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 AZU1P20160 251 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 C16orf54Q6UWD8 224 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 ITLN2Q8WWU7 325 aaPredicted RBP5.22□□□□□ -1.57
RTN4-203ENST00000357376 TRAV8-2A0A0B4J237 113 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 IGHV4-61A0A0C4DH41 118 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 A8MWV9 139 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 F8W1H4 67 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 PMVKQ15126 192 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 C9orf47Q6ZRZ4 202 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 SPXQ9BT56 116 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 GAGE12HA6NDE8 117 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 RRN3P1Q2M238 152 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 C11orf44Q8N8P7 122 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 C20orf78Q9BR46 151 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 HIGD1BQ9P298 99 aa5.22□□□□□ -1.57
RTN4-203ENST00000357376 SONP18583 2426 aaKnown RBP5.22□□□□□ -1.57
RTN4-203ENST00000357376 IGKV3OR2-268A0A0C4DH90 116 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 TMEM238C9JI98 176 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 COX6CP09669 75 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 RPL13AP40429 203 aaKnown RBP5.21□□□□□ -1.57
RTN4-203ENST00000357376 FBXL19-AS1Q494R0 122 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 FOXI2Q6ZQN5 318 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 MRPL53Q96EL3 112 aaKnown RBP5.21□□□□□ -1.57
RTN4-203ENST00000357376 C20orf173Q96LM9 149 aa5.21□□□□□ -1.57
RTN4-203ENST00000357376 PIEZO1Q92508 2521 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 IGHV7-4-1A0A0J9YVY3 117 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 ADARB2-AS1A8MUL3 147 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 G3V4G9 280 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 RNASE13Q5GAN3 156 aaKnown RBP5.21□□□□□ -1.58
RTN4-203ENST00000357376 PRR9Q5T870 116 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 GATD1Q8NB37 220 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 LINC01587Q99440 93 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 MYO18BQ8IUG5 2567 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 NAV2Q8IVL1 2488 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 BAALCQ8WXS3 180 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 AJUBAQ96IF1 538 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 ERG28Q9UKR5 140 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 MAP1AP78559 2803 aaPredicted RBP5.21□□□□□ -1.58
RTN4-203ENST00000357376 TAL2Q16559 108 aa5.21□□□□□ -1.58
RTN4-203ENST00000357376 AKAP13Q12802 2813 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 C9JAW5 83 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 KALRNO60229 2985 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 MSMBP08118 114 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 Q8N6K4 173 aa5.2□□□□□ -1.58
RTN4-203ENST00000357376 PHLDA1Q8WV24 401 aaPredicted RBP5.2□□□□□ -1.58
RTN4-203ENST00000357376 LMO4P61968 165 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms