RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PROP1O75360 226 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 MUSTN1Q8IVN3 82 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 IGHV4-30-2A0A087WSY4 118 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 CLPSL1A2RUU4 121 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 C2orf70A6NJV1 201 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 FREM3P0C091 2139 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 HIGD1BQ9P298 99 aa5.02□□□□□ -1.61
UPF2-201ENST00000356352 RPL39LQ96EH5 51 aaKnown RBP5.01□□□□□ -1.61
UPF2-201ENST00000356352 PLXNA4Q9HCM2 1894 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 IGHV4OR15-8A0A075B7B6 117 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 A0A087WW49 117 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 CTSGP08311 255 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 DEFB125Q8N687 156 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 KIR2DL5BQ8NHK3 375 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 SMAD5-AS1Q9Y6J3 95 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 FGF23Q9GZV9 251 aaPredicted RBP5.01□□□□□ -1.61
UPF2-201ENST00000356352 MAP1BP46821 2468 aaKnown RBP5.01□□□□□ -1.61
UPF2-201ENST00000356352 NCR3O14931 201 aa5.01□□□□□ -1.61
UPF2-201ENST00000356352 SVILO95425 2214 aa5□□□□□ -1.61
UPF2-201ENST00000356352 IGLV10-54A0A075B6I4 117 aa5□□□□□ -1.61
UPF2-201ENST00000356352 IGHV4-28A0A0C4DH34 117 aa5□□□□□ -1.61
UPF2-201ENST00000356352 SPAG11BQ08648 103 aa5□□□□□ -1.61
UPF2-201ENST00000356352 LRRK1Q38SD2 2015 aa5□□□□□ -1.61
UPF2-201ENST00000356352 TICRRQ7Z2Z1 1910 aa5□□□□□ -1.61
UPF2-201ENST00000356352 FNDC1Q4ZHG4 1894 aaPredicted RBP5□□□□□ -1.61
UPF2-201ENST00000356352 KIAA1671Q9BY89 1806 aa5□□□□□ -1.61
UPF2-201ENST00000356352 ASXL3Q9C0F0 2248 aa5□□□□□ -1.61
UPF2-201ENST00000356352 NPSP0C0P6 89 aa5□□□□□ -1.61
UPF2-201ENST00000356352 MAJINQ3KP22 176 aa5□□□□□ -1.61
UPF2-201ENST00000356352 Q6ZSR3 168 aa5□□□□□ -1.61
UPF2-201ENST00000356352 TMEM263Q8WUH6 116 aaKnown RBP5□□□□□ -1.61
UPF2-201ENST00000356352 Q8N9W7 124 aa5□□□□□ -1.61
UPF2-201ENST00000356352 A0A0J9YXV3 536 aa5□□□□□ -1.61
UPF2-201ENST00000356352 TRBV10-1A0A0K0K1A3 114 aa5□□□□□ -1.61
UPF2-201ENST00000356352 PCP2Q8IVA1 136 aa5□□□□□ -1.61
UPF2-201ENST00000356352 Q8N1Y9 231 aa5□□□□□ -1.61
UPF2-201ENST00000356352 ARTNQ5T4W7 220 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 TMEM61Q8N0U2 210 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 MDC1Q14676 2089 aaKnown RBP4.99□□□□□ -1.61
UPF2-201ENST00000356352 KIR2DL5BA0A0G2JN68 375 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 KIR2DL5BA0A0G2JPC4 375 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 A4D1N5 150 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 H3BT86 120 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 KIR2DL5AQ8N109 375 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 C14orf132Q9NPU4 83 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 IGHV1-58A0A0C4DH39 117 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 E9PLD3 99 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 CCL25O15444 150 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 CTRLP40313 264 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 BAALCQ8WXS3 180 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 COA6Q5JTJ3 125 aaKnown RBP4.99□□□□□ -1.61
UPF2-201ENST00000356352 TEN1Q86WV5 123 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 SNRNP200O75643 2136 aaKnown RBP4.99□□□□□ -1.61
UPF2-201ENST00000356352 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 TRBV12-3P01733 135 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 GATA1P15976 413 aaPredicted RBP4.99□□□□□ -1.61
UPF2-201ENST00000356352 COX7BP24311 80 aa4.99□□□□□ -1.61
UPF2-201ENST00000356352 TPRP12270 2363 aaKnown RBP4.98□□□□□ -1.61
UPF2-201ENST00000356352 LGALS9O00182 355 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 IGKV1-17P01599 117 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 LRRC75A-AS1Q8N1F1 130 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 H7C423 109 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 GRNP28799 593 aaKnown RBP4.98□□□□□ -1.61
UPF2-201ENST00000356352 NDUFA11Q86Y39 141 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 RNF138Q8WVD3 245 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 ODF3Q96PU9 254 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 J3KT08 172 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 BLCAPP62952 87 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 PLXNA2O75051 1894 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 TSC2P49815 1807 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 SEM1Q6ZVN7 128 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 ESPL1Q14674 2120 aa4.98□□□□□ -1.61
UPF2-201ENST00000356352 SPRY2O43597 315 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 ADORA2A-AS1P86434 159 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 TEX22C9J3V5 150 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 RS1O15537 224 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 UFSP1Q6NVU6 142 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 SMIM9A6NGZ8 99 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 LECT2O14960 151 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 VWA8A3KMH1 1905 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 COL4A6Q14031 1691 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 ICE1Q9Y2F5 2266 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 H0Y9J4 135 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 DEFB135Q30KP9 77 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 PATE2Q6UY27 113 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 ASPHD1Q5U4P2 390 aa4.97□□□□□ -1.61
UPF2-201ENST00000356352 IGKV3D-7A0A0C4DH55 119 aa4.96□□□□□ -1.61
UPF2-201ENST00000356352 A6NDX4 124 aa4.96□□□□□ -1.61
UPF2-201ENST00000356352 FBXL19-AS1Q494R0 122 aa4.96□□□□□ -1.61
UPF2-201ENST00000356352 SIRPDQ9H106 197 aa4.96□□□□□ -1.61
UPF2-201ENST00000356352 RP1P56715 2156 aa4.96□□□□□ -1.62
UPF2-201ENST00000356352 WDR81Q562E7 1941 aa4.96□□□□□ -1.62
UPF2-201ENST00000356352 LYRM9A8MSI8 78 aa4.96□□□□□ -1.62
UPF2-201ENST00000356352 ZNF524Q96C55 264 aa4.96□□□□□ -1.62
UPF2-201ENST00000356352 KLK12Q9UKR0 248 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms