RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C12orf74Q32Q52 190 aa9.56□□□□□ -0.88
COLCA1-201ENST00000355430 C10orf126Q8N4M7 172 aa9.56□□□□□ -0.88
COLCA1-201ENST00000355430 LINC00574Q9H8X3 128 aa9.56□□□□□ -0.88
COLCA1-201ENST00000355430 IGLV1-47P01700 117 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 TMEM95Q3KNT9 176 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 PRR14LQ5THK1 2151 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 ZFP36P26651 326 aaKnown RBP9.55□□□□□ -0.88
COLCA1-201ENST00000355430 SPXQ9BT56 116 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 SPINK8P0C7L1 97 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 PMVKQ15126 192 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 RMI2Q96E14 147 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 EXPH5Q8NEV8 1989 aa9.55□□□□□ -0.88
COLCA1-201ENST00000355430 CTSGP08311 255 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 KLK9Q9UKQ9 250 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 C9JAW5 83 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 TAL2Q16559 108 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 C1orf159Q96HA4 380 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 PRAC2D3DTV9 90 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 LY6G6DO95868 133 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 DEFB136Q30KP8 78 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 C22orf34Q6ZV56 151 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 HCFC1P51610 2035 aa9.54□□□□□ -0.88
COLCA1-201ENST00000355430 IGHV7-81A0A0B4J1V7 117 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 RBAKDNA6NC62 111 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 ATXN8Q156A1 80 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 SPAG8Q99932 426 aaPredicted RBP9.53□□□□□ -0.88
COLCA1-201ENST00000355430 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 INSL3P51460 131 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TMEM89A2RUT3 159 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 SDHAF1A6NFY7 115 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 F6UB75 175 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 RHODO00212 210 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 BLCAPP62952 87 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 LINC00310P59036 64 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TNFRSF13BO14836 293 aaPredicted RBP9.53□□□□□ -0.88
COLCA1-201ENST00000355430 GNRH2O43555 120 aa9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TRPT1Q86TN4 253 aaKnown RBP9.53□□□□□ -0.88
COLCA1-201ENST00000355430 TRAV12-2A0A075B6T6 113 aa9.52□□□□□ -0.88
COLCA1-201ENST00000355430 SIRPDQ9H106 197 aa9.52□□□□□ -0.88
COLCA1-201ENST00000355430 SMAD5-AS1Q9Y6J3 95 aa9.52□□□□□ -0.88
COLCA1-201ENST00000355430 FXYD2P54710 66 aa9.52□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
COLCA1-201ENST00000355430 ATP6V0BQ99437 205 aa9.52□□□□□ -0.89
COLCA1-201ENST00000355430 C20orf78Q9BR46 151 aa9.52□□□□□ -0.89
COLCA1-201ENST00000355430 MORN3Q6PF18 240 aaPredicted RBP9.52□□□□□ -0.89
COLCA1-201ENST00000355430 BOD1L2Q8IYS8 172 aa9.52□□□□□ -0.89
COLCA1-201ENST00000355430 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 SCGB1A1P11684 91 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 AZU1P20160 251 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 CENPFP49454 3210 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 SLURP1P55000 103 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
COLCA1-201ENST00000355430 RPL39LQ96EH5 51 aaKnown RBP9.51□□□□□ -0.89
COLCA1-201ENST00000355430 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
COLCA1-201ENST00000355430 LMO4P61968 165 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 C5orf56Q8N8D9 126 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
COLCA1-201ENST00000355430 TNCP24821 2201 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 IGLL5B9A064 214 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 ZNF493Q6ZR52 646 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 SPATA12Q7Z6I5 190 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 PIFOQ8TCI5 191 aa9.5□□□□□ -0.89
COLCA1-201ENST00000355430 BUB3O43684 328 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 MRPL53Q96EL3 112 aaKnown RBP9.49□□□□□ -0.89
COLCA1-201ENST00000355430 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE7O76087 117 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE12FP0CL80 117 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 CFHR3Q02985 330 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
COLCA1-201ENST00000355430 PTPN13Q12923 2485 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 PLCE1Q9P212 2302 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 I3L3M4 83 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 ZNF80P51504 273 aaPredicted RBP9.48□□□□□ -0.89
COLCA1-201ENST00000355430 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 CITED2Q99967 270 aaPredicted RBP9.48□□□□□ -0.89
COLCA1-201ENST00000355430 Q8N9W7 124 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 PPDPFLQ8WWR9 84 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 ODF1Q14990 250 aa9.48□□□□□ -0.89
COLCA1-201ENST00000355430 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms