RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 DIRC1Q969H9 104 aa10.48□□□□□ -0.73
LMBR1-201ENST00000353442 USF3Q68DE3 2245 aa10.48□□□□□ -0.73
LMBR1-201ENST00000353442 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 LY96Q9Y6Y9 160 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 FREM3P0C091 2139 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 CFPP27918 469 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 CTSZQ9UBR2 303 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 F8VRH5 84 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 CCL25O15444 150 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 PSMB8P28062 276 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 MYCNOSP40205 109 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 RITA1Q96K30 269 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 C9orf85Q96MD7 179 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 TRBV6-6A0A0A6YYG2 114 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 H3BUA1 57 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 IGLC2P0DOY2 106 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 WT1P19544 449 aaPredicted RBP10.47□□□□□ -0.73
LMBR1-201ENST00000353442 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
LMBR1-201ENST00000353442 C17orf82Q86X59 251 aaPredicted RBP10.46□□□□□ -0.73
LMBR1-201ENST00000353442 PHF3Q92576 2039 aaKnown RBP10.46□□□□□ -0.73
LMBR1-201ENST00000353442 C2orf70A6NJV1 201 aa10.46□□□□□ -0.73
LMBR1-201ENST00000353442 FHL1Q13642 323 aa10.46□□□□□ -0.73
LMBR1-201ENST00000353442 BRCA1P38398 1863 aaKnown RBP10.46□□□□□ -0.74
LMBR1-201ENST00000353442 J3QRE1 110 aa10.46□□□□□ -0.74
LMBR1-201ENST00000353442 SIRPDQ9H106 197 aa10.46□□□□□ -0.74
LMBR1-201ENST00000353442 IGLC1P0CG04 106 aa10.46□□□□□ -0.74
LMBR1-201ENST00000353442 MED12Q93074 2177 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 C14orf177Q52M58 125 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 ZNF491Q8N8L2 437 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 IGKV2D-26A0A0A0MRZ7 120 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 Q8N1Y9 231 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
LMBR1-201ENST00000353442 ZNF407Q9C0G0 2248 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 Q8N9W7 124 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 GREB1Q4ZG55 1949 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 ADORA2A-AS1P86434 159 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 KIR2DL5BQ8NHK3 375 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 C4orf3Q8WVX3 66 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 K7ERS5 55 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
LMBR1-201ENST00000353442 TRAV1-1A0A0B4J248 108 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.43□□□□□ -0.74
LMBR1-201ENST00000353442 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 MLST8Q9BVC4 326 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 RPL39P62891 51 aaKnown RBP10.43□□□□□ -0.74
LMBR1-201ENST00000353442 PYY3Q5JQD4 70 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 CFC1BP0CG36 223 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 CFC1P0CG37 223 aa10.43□□□□□ -0.74
LMBR1-201ENST00000353442 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
LMBR1-201ENST00000353442 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
LMBR1-201ENST00000353442 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
LMBR1-201ENST00000353442 COL4A1P02462 1669 aa10.42□□□□□ -0.74
LMBR1-201ENST00000353442 LINC00269Q8N2A0 174 aa10.42□□□□□ -0.74
LMBR1-201ENST00000353442 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
LMBR1-201ENST00000353442 TMEM14CQ9P0S9 112 aa10.42□□□□□ -0.74
LMBR1-201ENST00000353442 FGF23Q9GZV9 251 aaPredicted RBP10.42□□□□□ -0.74
LMBR1-201ENST00000353442 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 ZNF493Q6ZR52 646 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 SPANXA1Q9NS26 97 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 POLR3KQ9Y2Y1 108 aaPredicted RBP10.41□□□□□ -0.74
LMBR1-201ENST00000353442 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 IGHV7-81A0A0B4J1V7 117 aa10.41□□□□□ -0.74
LMBR1-201ENST00000353442 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 U3KQA8 63 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 Q0VG73 95 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 THSD7AQ9UPZ6 1657 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 NYNRINQ9P2P1 1898 aaKnown RBP10.4□□□□□ -0.74
LMBR1-201ENST00000353442 KMT2EQ8IZD2 1858 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 PLCE1Q9P212 2302 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
LMBR1-201ENST00000353442 LINC00311Q8N616 119 aa10.4□□□□□ -0.75
LMBR1-201ENST00000353442 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.75
LMBR1-201ENST00000353442 C15orf65H3BRN8 121 aa10.4□□□□□ -0.75
LMBR1-201ENST00000353442 COX7BP24311 80 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 QRFPP83859 136 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 WNK3Q9BYP7 1800 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 IGF1P05019 195 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 C5orf56Q8N8D9 126 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 C9JQL5 133 aa10.39□□□□□ -0.75
LMBR1-201ENST00000353442 PROK2Q9HC23 129 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms