RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 TEX43Q6ZNM6 134 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 ZFAND2AQ8N6M9 145 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 OR8A1Q8NGG7 326 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 TMEM191AQ9H0A3 160 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
CD44-205ENST00000352818 IGHV4-4A0A075B6R2 117 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 IGHV4OR15-8A0A075B7B6 117 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 A0A087WW49 117 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 TMSB15BA0A087X1C1 80 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 TRAV2A0A0B4J234 112 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 HSBP1O75506 76 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 ORM1P02763 201 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
CD44-205ENST00000352818 NIT1Q86X76 327 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 C4orf3Q8WVX3 66 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 TM2D3Q9BRN9 247 aa6.1□□□□□ -1.43
CD44-205ENST00000352818 ZMAT5Q9UDW3 170 aaKnown RBP6.1□□□□□ -1.43
CD44-205ENST00000352818 TRAV21A0A0B4J279 112 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 IGKV3D-20A0A0C4DH25 116 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 KIR2DL5BA0A0G2JN68 375 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 KIR2DL5BA0A0G2JPC4 375 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 K7EQG2 157 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 PPBPP02775 128 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 CACNG7P62955 275 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 PRR9Q5T870 116 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 KIR2DL5AQ8N109 375 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 TPPP3Q9BW30 176 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 LAMTOR2Q9Y2Q5 125 aa6.09□□□□□ -1.43
CD44-205ENST00000352818 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
CD44-205ENST00000352818 C2orf70A6NJV1 201 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 KLLNB2CW77 178 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 LINC01619G3V211 115 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 LY6G6CO95867 125 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 SCGB1D1O95968 90 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 LINC00614P0C842 121 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 NTF3P20783 257 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 SYNJ2BPP57105 145 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 SNRPD3P62318 126 aaKnown RBP6.08□□□□□ -1.44
CD44-205ENST00000352818 RPL11P62913 178 aaKnown RBP6.08□□□□□ -1.44
CD44-205ENST00000352818 MRPL51Q4U2R6 128 aaKnown RBP6.08□□□□□ -1.44
CD44-205ENST00000352818 RNASEKQ6P5S7 137 aaKnown RBP6.08□□□□□ -1.44
CD44-205ENST00000352818 ORMDL3Q8N138 153 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 Q8N976 141 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 MS4A6AQ9H2W1 248 aa6.08□□□□□ -1.44
CD44-205ENST00000352818 LINC01546A6NGU7 62 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 M0R2Z0 102 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
CD44-205ENST00000352818 C3orf79P0CE67 100 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 EDN2P20800 178 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 LEPP41159 167 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 CTAG1AP78358 180 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 TWIST1Q15672 202 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 AMN1Q8IY45 258 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 PRELID3AQ96N28 172 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 PEMTQ9UBM1 199 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 TSSC4Q9Y5U2 329 aaPredicted RBP6.07□□□□□ -1.44
CD44-205ENST00000352818 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
CD44-205ENST00000352818 IGHV1-24A0A0C4DH33 117 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 A0A0J9YX75 114 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 A8MTW9 85 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 D6R8Y8 96 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 CRXO43186 299 aaPredicted RBP6.06□□□□□ -1.44
CD44-205ENST00000352818 NXPH4O95158 308 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 ZNF705DP0CH99 300 aaPredicted RBP6.06□□□□□ -1.44
CD44-205ENST00000352818 ZNF705BP0CI00 300 aaPredicted RBP6.06□□□□□ -1.44
CD44-205ENST00000352818 DDTP30046 118 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 ASIPP42127 132 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 KRTDAPP60985 99 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 DEFB125Q8N687 156 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 RNF185Q96GF1 192 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 C20orf144Q9BQM9 153 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 ZMAT4Q9H898 229 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 SCRT2Q9NQ03 307 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
CD44-205ENST00000352818 PRSS47A8MTI9 375 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 F6UB75 175 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 BTF3P20290 206 aaKnown RBP6.05□□□□□ -1.44
CD44-205ENST00000352818 PMCHL1Q16048 86 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 TDRG1Q3Y452 100 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 FOXI2Q6ZQN5 318 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 C18orf65Q6ZTR6 163 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 SMIM15Q7Z3B0 74 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 OR9G4Q8NGQ1 327 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 MCRIP2Q9BUT9 160 aaKnown RBP6.05□□□□□ -1.44
CD44-205ENST00000352818 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
CD44-205ENST00000352818 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 IGKV3-7A0A075B6H7 116 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 C7orf71A4D174 169 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 H3BVH4 76 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 LEPROTL1O95214 131 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 CSN3P07498 182 aa6.04□□□□□ -1.44
CD44-205ENST00000352818 TSPOP30536 169 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms