RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 GNRH2O43555 120 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 UBE2V1Q13404 147 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 LINC00477Q96M19 166 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 C19orf73Q9NVV2 129 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 XKRY2A2RUG3 117 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 SH2D1AO60880 128 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 IBA57Q5T440 356 aaKnown RBP6.76□□□□□ -1.33
USP4-202ENST00000351842 LOC102724200A0A096LPH7 203 aaPredicted RBP6.76□□□□□ -1.33
USP4-202ENST00000351842 ZNF253O75346 499 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 SCGB1D1O95968 90 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 P01737 135 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
USP4-202ENST00000351842 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
USP4-202ENST00000351842 SAMD5Q5TGI4 173 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 SFRP2Q96HF1 295 aa6.76□□□□□ -1.33
USP4-202ENST00000351842 DUSP14O95147 198 aaKnown RBP6.75□□□□□ -1.33
USP4-202ENST00000351842 CRIP1P50238 77 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 K7EIL1 84 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 FAM159AQ6UWV7 190 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 ZFAND2AQ8N6M9 145 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 OR10G8Q8NGN5 311 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 C11orf21Q9P2W6 132 aa6.75□□□□□ -1.33
USP4-202ENST00000351842 H3BVH4 76 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 ANXA2RQ3ZCQ2 193 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 IGF2BP2-AS1Q96M15 143 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 PRKDCP78527 4128 aaKnown RBP6.74□□□□□ -1.33
USP4-202ENST00000351842 M0R381 172 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 LTAP01374 205 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 IGLV2-8P01709 118 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 FAM162BQ5T6X4 162 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 TMEM18Q96B42 140 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 NPIPB6E9PJ23 425 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 AZU1P20160 251 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 OCIAD2Q56VL3 154 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 SAMD13Q5VXD3 122 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 TRPT1Q86TN4 253 aaKnown RBP6.74□□□□□ -1.33
USP4-202ENST00000351842 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 IL36BQ9NZH7 164 aa6.74□□□□□ -1.33
USP4-202ENST00000351842 IGHV3-73A0A0B4J1V6 119 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 C7orf71A4D174 169 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 HTN3P15516 51 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 TSPOP30536 169 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 CAMPP49913 170 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 MRPL54Q6P161 138 aaKnown RBP6.73□□□□□ -1.33
USP4-202ENST00000351842 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 TMEM189A5PLL7 270 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 INSP01308 110 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 DEFB130BP0DP73 79 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 DEFB130AP0DP74 79 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 AMTNQ6UX39 209 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 OR11H2Q8NH07 326 aa6.73□□□□□ -1.33
USP4-202ENST00000351842 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 LINC00310P59036 64 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 Q0VG73 95 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 CRXO43186 299 aaPredicted RBP6.72□□□□□ -1.33
USP4-202ENST00000351842 FAM74A4Q5TZK3 123 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 OR2K2Q8NGT1 345 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 V9GYV3 84 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 LEPP41159 167 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 STPG4Q8N801 248 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
USP4-202ENST00000351842 TRAV21A0A0B4J279 112 aa6.71□□□□□ -1.33
USP4-202ENST00000351842 GIG44P09565 113 aaPredicted RBP6.71□□□□□ -1.33
USP4-202ENST00000351842 COX19Q49B96 90 aa6.71□□□□□ -1.33
USP4-202ENST00000351842 Q6ZVH6 145 aa6.71□□□□□ -1.33
USP4-202ENST00000351842 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.33
USP4-202ENST00000351842 OSTCQ9NRP0 149 aa6.71□□□□□ -1.33
USP4-202ENST00000351842 IGKV3D-20A0A0C4DH25 116 aa6.71□□□□□ -1.34
USP4-202ENST00000351842 GNB1LQ9BYB4 327 aa6.71□□□□□ -1.34
USP4-202ENST00000351842 C1orf158Q8N1D5 194 aa6.71□□□□□ -1.34
USP4-202ENST00000351842 RCHY1Q96PM5 261 aa6.71□□□□□ -1.34
USP4-202ENST00000351842 NOP10Q9NPE3 64 aaKnown RBP6.71□□□□□ -1.34
USP4-202ENST00000351842 MRPL16Q9NX20 251 aaKnown RBP6.71□□□□□ -1.34
USP4-202ENST00000351842 HIGD1CA8MV81 97 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 APOC4P55056 127 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 EGFEM1PQ0D2K5 195 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 RRN3P1Q2M238 152 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 MLST8Q9BVC4 326 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 MSRB1Q9NZV6 116 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 SLAQ13239 276 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 OR10AG1Q8NH19 301 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 C20orf144Q9BQM9 153 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 JPT2Q9H910 190 aa6.7□□□□□ -1.34
USP4-202ENST00000351842 TRAV2A0A0B4J234 112 aa6.69□□□□□ -1.34
USP4-202ENST00000351842 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
USP4-202ENST00000351842 FOXA3P55318 350 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms