RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
PTPN11-201ENST00000351677 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 Q8N7P7 452 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 TSSC4Q9Y5U2 329 aaPredicted RBP12.45□□□□□ -0.42
PTPN11-201ENST00000351677 TECTAO75443 2155 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 BUB3O43684 328 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 C11orf1Q9H5F2 150 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
PTPN11-201ENST00000351677 J3QKU1 62 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 Q6ZPA2 131 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 KIR2DL5BA0A0G2JN68 375 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 KIR2DL5BA0A0G2JPC4 375 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 KIR2DL5AQ8N109 375 aa12.44□□□□□ -0.42
PTPN11-201ENST00000351677 C5orf56Q8N8D9 126 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
PTPN11-201ENST00000351677 SRSF2Q01130 221 aaKnown RBP12.43□□□□□ -0.42
PTPN11-201ENST00000351677 F8W1H4 67 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 CCL24O00175 119 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 SIVA1O15304 175 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 WI2-2373I1.2A0A1W2PRP0 233 aa12.43□□□□□ -0.42
PTPN11-201ENST00000351677 TAL2Q16559 108 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 HERVK_113P63121 156 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 MUC6Q6W4X9 2439 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 APOC4P55056 127 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
PTPN11-201ENST00000351677 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
PTPN11-201ENST00000351677 UTF1Q5T230 341 aa12.41□□□□□ -0.42
PTPN11-201ENST00000351677 PCNX3Q9H6A9 2034 aa12.41□□□□□ -0.42
PTPN11-201ENST00000351677 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
PTPN11-201ENST00000351677 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
PTPN11-201ENST00000351677 CRIP3Q6Q6R5 217 aa12.4□□□□□ -0.42
PTPN11-201ENST00000351677 DEFB1P60022 68 aa12.4□□□□□ -0.42
PTPN11-201ENST00000351677 RHOHQ15669 191 aa12.4□□□□□ -0.42
PTPN11-201ENST00000351677 C10orf105Q8TEF2 133 aa12.4□□□□□ -0.42
PTPN11-201ENST00000351677 A0A0J9YY99 117 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 F8WEM9 126 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 DEFB113Q30KQ7 82 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 ANKRD39Q53RE8 183 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 CRYGCP07315 174 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 Q8NA96 180 aa12.39□□□□□ -0.43
PTPN11-201ENST00000351677 SOCS3O14543 225 aa12.38□□□□□ -0.43
PTPN11-201ENST00000351677 CCL25O15444 150 aa12.38□□□□□ -0.43
PTPN11-201ENST00000351677 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
PTPN11-201ENST00000351677 XCL1P47992 114 aa12.38□□□□□ -0.43
PTPN11-201ENST00000351677 BRWD1-AS2P59051 145 aa12.38□□□□□ -0.43
PTPN11-201ENST00000351677 K7EMI3 77 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 PROP1O75360 226 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 CHD3Q12873 2000 aaKnown RBP12.37□□□□□ -0.43
PTPN11-201ENST00000351677 IGHV4OR15-8A0A075B7B6 117 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 A0A087WW49 117 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 CARD19Q96LW7 228 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 P0C879 139 aa12.37□□□□□ -0.43
PTPN11-201ENST00000351677 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
PTPN11-201ENST00000351677 SCRT2Q9NQ03 307 aa12.36□□□□□ -0.43
PTPN11-201ENST00000351677 ZNF503Q96F45 646 aa12.36□□□□□ -0.43
PTPN11-201ENST00000351677 Q9H8V8 135 aa12.36□□□□□ -0.43
PTPN11-201ENST00000351677 INAFM2P0DMQ5 153 aa12.36□□□□□ -0.43
PTPN11-201ENST00000351677 EP400Q96L91 3159 aa12.35□□□□□ -0.43
PTPN11-201ENST00000351677 ZFP2Q6ZN57 461 aa12.35□□□□□ -0.43
PTPN11-201ENST00000351677 Q6ZQT7 251 aa12.35□□□□□ -0.43
PTPN11-201ENST00000351677 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
PTPN11-201ENST00000351677 IGKV1D-37A0A075B6S9 117 aa12.35□□□□□ -0.43
PTPN11-201ENST00000351677 NKAPP1Q8N9T2 125 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
PTPN11-201ENST00000351677 FANCD2OSQ96PS1 177 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 Q8N1Y9 231 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 SIRPDQ9H106 197 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 TRBV12-3P01733 135 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 C9orf47Q6ZRZ4 202 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
PTPN11-201ENST00000351677 RPL39P62891 51 aaKnown RBP12.33□□□□□ -0.44
PTPN11-201ENST00000351677 C22orf34Q6ZV56 151 aa12.33□□□□□ -0.44
PTPN11-201ENST00000351677 A0A0J9YXV3 536 aa12.33□□□□□ -0.44
PTPN11-201ENST00000351677 CFC1BP0CG36 223 aa12.33□□□□□ -0.44
PTPN11-201ENST00000351677 CFC1P0CG37 223 aa12.33□□□□□ -0.44
PTPN11-201ENST00000351677 UNQ9165/PRO28630Q6UXU0 137 aa12.32□□□□□ -0.44
PTPN11-201ENST00000351677 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
PTPN11-201ENST00000351677 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 NACAE9PAV3 2078 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 CRLF1O75462 422 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 CDK2AP2O75956 126 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 CGB3P0DN86 165 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 CGB7P0DN87 165 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 NTN5Q8WTR8 489 aaPredicted RBP12.31□□□□□ -0.44
PTPN11-201ENST00000351677 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
PTPN11-201ENST00000351677 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms