RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 VPREB3Q9UKI3 123 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 PROCRQ9UNN8 238 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
UBE2D3-204ENST00000349311 FAM208BQ5VWN6 2430 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 TRAV8-2A0A0B4J237 113 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 TRAV8-4A0A0B4J246 113 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 H3BTX0 84 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 BRI3O95415 125 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 IGLV1-44P01699 117 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 SLC25A16P16260 332 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 CRIP1P50238 77 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 LYZP61626 148 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 KLRB1Q12918 225 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 PDE6HQ13956 83 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 DIAPH2-AS1Q14236 149 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 MEIG1Q5JSS6 88 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 RNF185Q96GF1 192 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 MRPL20Q9BYC9 149 aaKnown RBP5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 MRPL36Q9P0J6 103 aaKnown RBP5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 TNCP24821 2201 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 ICE1Q9Y2F5 2266 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 ZFYVE26Q68DK2 2539 aa5.88□□□□□ -1.47
UBE2D3-204ENST00000349311 NBASA2RRP1 2371 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 H3BRN7 92 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 H3BVH4 76 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 K7EMI3 77 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 SLC25A20O43772 301 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 TCL1BO95988 128 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 IGKV1-16P04430 117 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 PRTN3P24158 256 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 SRSF9Q13242 221 aaKnown RBP eCLIP5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 LY6DQ14210 128 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 FAM159AQ6UWV7 190 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 GFRALQ6UXV0 394 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 SIGLEC15Q6ZMC9 328 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 CNEP1R1Q8N9A8 125 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 PTH2Q96A98 100 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 DNAJC30Q96LL9 226 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 KIR2DL4Q99706 377 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 CITED2Q99967 270 aaPredicted RBP5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 SPTBN1Q01082 2364 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 BAHCC1Q9P281 2608 aa5.87□□□□□ -1.47
UBE2D3-204ENST00000349311 ANKHD1Q8IWZ3 2542 aaKnown RBP5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 DSCAMO60469 2012 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 IGLV2-18A0A075B6J9 118 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 IGHV3OR15-7A0A075B7D8 119 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 TMSB15BA0A087X1C1 80 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 ZNF815PA8K554 130 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 NDUFA3O95167 84 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 HLA-DMBP28068 263 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 RPL13AP40429 203 aaKnown RBP5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 RPL27AP46776 148 aaKnown RBP5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 HERVK_113P61574 105 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 SPRNQ5BIV9 151 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 PAPPA-AS1Q5QFB9 102 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 NDUFA11Q86Y39 141 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 C8orf31Q8N9H6 132 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 NRGNQ92686 78 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 SLC25A15Q9Y619 301 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 ARFGEF3Q5TH69 2177 aa5.86□□□□□ -1.47
UBE2D3-204ENST00000349311 LYZL6O75951 148 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 LHBP01229 141 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 IGHV3-48P01763 117 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 CD7P09564 240 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 P0DMU3 169 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 FAM231AP0DMU4 169 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 FAM231CP0DMU5 169 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 HES1Q14469 280 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 ZFP2Q6ZN57 461 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 C10orf126Q8N4M7 172 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 LINC00311Q8N616 119 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 C15orf53Q8NAA6 179 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 ZNRF1Q8ND25 227 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 ONECUT1Q9UBC0 465 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 FZR1Q9UM11 496 aa5.85□□□□□ -1.47
UBE2D3-204ENST00000349311 TRAV2A0A0B4J234 112 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 C9JAW5 83 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 IGLV2-23P01705 113 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 FBXL19-AS1Q494R0 122 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 LRRC75A-AS1Q8N1F1 130 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 RASL10AQ92737 203 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 TIMD4Q96H15 378 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 PRADC1Q9BSG0 188 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 PEMTQ9UBM1 199 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 PRO1854Q9UHT4 67 aa5.84□□□□□ -1.47
UBE2D3-204ENST00000349311 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 E7EUB6 86 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 H3BMM0 161 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 SCGB2A1O75556 95 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 CECR9P0C854 216 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 ID1P41134 155 aa5.83□□□□□ -1.48
UBE2D3-204ENST00000349311 C10orf55Q5SWW7 151 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms