RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 H7C1H1 209 aa13.63□□□□□ -0.23
PTP4A3-202ENST00000349124 TMEM95Q3KNT9 176 aa13.63□□□□□ -0.23
PTP4A3-202ENST00000349124 DPH3P1Q9H4G8 78 aa13.63□□□□□ -0.23
PTP4A3-202ENST00000349124 CHTOPQ9Y3Y2 248 aaKnown RBP13.63□□□□□ -0.23
PTP4A3-202ENST00000349124 ZANQ9Y493 2812 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 F8VRH5 84 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 LENEPQ9Y5L5 61 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 G3V4G9 280 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 OVOL1O14753 267 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 C2orf66Q6UXQ4 117 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
PTP4A3-202ENST00000349124 EMP1P54849 157 aa13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 COTL1Q14019 142 aa13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 TMEM238LA0A1B0GVL6 79 aa13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 NEXN-AS1Q8NBZ9 246 aa13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
PTP4A3-202ENST00000349124 PLNP26678 52 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 AMTNQ6UX39 209 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 PRSS29PA6NIE9 313 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 IGHG2P01859 326 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 MTURNQ8N3F0 131 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 BAALCQ8WXS3 180 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 FAM19A4Q96LR4 140 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 PKD1L2Q7Z442 2459 aa13.6□□□□□ -0.23
PTP4A3-202ENST00000349124 IGLL5B9A064 214 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 AVPP01185 164 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 A0A087WWL8 130 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 HLA-DRB4P13762 266 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 ORMDL2Q53FV1 153 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 C10orf99Q6UWK7 81 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 HLA-DRB4X5D2U9 266 aa13.59□□□□□ -0.23
PTP4A3-202ENST00000349124 IGHV4-30-2A0A087WSY4 118 aa13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 DUSP14O95147 198 aaKnown RBP13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 USP9XQ93008 2570 aaPredicted RBP13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 POLQO75417 2590 aa13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 IGKV3-20P01619 116 aa13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 C20orf78Q9BR46 151 aa13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 CENPEQ02224 2701 aa13.58□□□□□ -0.24
PTP4A3-202ENST00000349124 TRAV12-1A0A0B4J245 112 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 TEX48A0A1B0GUV7 120 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 A6NDX4 124 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 LINC00315P59091 139 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 WFDC2Q14508 124 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 KLHL30-AS1Q8NEE0 82 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 CUBNO60494 3623 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 E9PLD3 99 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 OR11H1Q8NG94 326 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 OR11H2Q8NH07 326 aa13.57□□□□□ -0.24
PTP4A3-202ENST00000349124 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 H3BMG7 143 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 ATP6V0BQ99437 205 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 TRAV12-3A0A0B4J271 114 aa13.56□□□□□ -0.24
PTP4A3-202ENST00000349124 RPL39P62891 51 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 ZNF479Q96JC4 524 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 KIF25-AS1Q9Y6Z4 181 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 TSHBP01222 138 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 CRYGDP07320 174 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 LGALS1P09382 135 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 PIMREGQ9BSJ6 248 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 CD300EQ496F6 205 aaPredicted RBP13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 DAZ1Q9NQZ3 744 aaKnown RBP13.55□□□□□ -0.24
PTP4A3-202ENST00000349124 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
PTP4A3-202ENST00000349124 NRGNQ92686 78 aa13.54□□□□□ -0.24
PTP4A3-202ENST00000349124 SLC25A16P16260 332 aa13.54□□□□□ -0.24
PTP4A3-202ENST00000349124 FOXI2Q6ZQN5 318 aa13.54□□□□□ -0.24
PTP4A3-202ENST00000349124 CCL19Q99731 98 aa13.54□□□□□ -0.24
PTP4A3-202ENST00000349124 F5H697 171 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 IGLV1-40P01703 118 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 CD7P09564 240 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 ATP5J2P56134 94 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 SH2D6Q7Z4S9 175 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
PTP4A3-202ENST00000349124 ZNF688P0C7X2 276 aa13.52□□□□□ -0.24
PTP4A3-202ENST00000349124 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.24
PTP4A3-202ENST00000349124 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
PTP4A3-202ENST00000349124 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.25
PTP4A3-202ENST00000349124 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
PTP4A3-202ENST00000349124 KLLNB2CW77 178 aa13.51□□□□□ -0.25
PTP4A3-202ENST00000349124 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
PTP4A3-202ENST00000349124 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
PTP4A3-202ENST00000349124 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
PTP4A3-202ENST00000349124 ZNF815PA8K554 130 aa13.51□□□□□ -0.25
PTP4A3-202ENST00000349124 TAL2Q16559 108 aa13.5□□□□□ -0.25
PTP4A3-202ENST00000349124 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
PTP4A3-202ENST00000349124 SCGB2A2Q13296 93 aa13.5□□□□□ -0.25
PTP4A3-202ENST00000349124 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms