RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
TRIM4-201ENST00000349062 NPYP01303 97 aa10.57□□□□□ -0.72
TRIM4-201ENST00000349062 FABP2P12104 132 aa10.57□□□□□ -0.72
TRIM4-201ENST00000349062 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
TRIM4-201ENST00000349062 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 MGPP08493 103 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 IFI27L1Q96BM0 104 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 NHP2Q9NX24 153 aaKnown RBP10.56□□□□□ -0.72
TRIM4-201ENST00000349062 C16orf54Q6UWD8 224 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
TRIM4-201ENST00000349062 GNRH2O43555 120 aa10.55□□□□□ -0.72
TRIM4-201ENST00000349062 IGHV4-31P0DP07 118 aa10.55□□□□□ -0.72
TRIM4-201ENST00000349062 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
TRIM4-201ENST00000349062 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
TRIM4-201ENST00000349062 NDUFA4O00483 81 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 DSCR9P59020 149 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 H3BRM9 83 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 K7EP34 96 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 USMG5Q96IX5 58 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 TMEM160Q9NX00 188 aa10.54□□□□□ -0.72
TRIM4-201ENST00000349062 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
TRIM4-201ENST00000349062 HSD52Q0P140 79 aa10.53□□□□□ -0.72
TRIM4-201ENST00000349062 SAMD13Q5VXD3 122 aa10.53□□□□□ -0.72
TRIM4-201ENST00000349062 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
TRIM4-201ENST00000349062 IGHV4OR15-8A0A075B7B6 117 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 A0A087WW49 117 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 G3V4G9 280 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 HBDP02042 147 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 SLURP1P55000 103 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 C14orf178Q8N769 122 aaPredicted RBP10.52□□□□□ -0.72
TRIM4-201ENST00000349062 TMEM190Q8WZ59 177 aa10.52□□□□□ -0.72
TRIM4-201ENST00000349062 A0A1W2PPM0 123 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 FXYD2P54710 66 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
TRIM4-201ENST00000349062 LEPP41159 167 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 FOXC2Q99958 501 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 VPREB3Q9UKI3 123 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
TRIM4-201ENST00000349062 A0A096LNJ9 63 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 PRM2P04554 102 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
TRIM4-201ENST00000349062 C9orf139Q6ZV77 190 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 F5H697 171 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 FGF6P10767 208 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 Q6AWC8 147 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 NEGR1Q7Z3B1 354 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
TRIM4-201ENST00000349062 IGKV2D-26A0A0A0MRZ7 120 aa10.5□□□□□ -0.73
TRIM4-201ENST00000349062 RPS20P60866 119 aaKnown RBP10.5□□□□□ -0.73
TRIM4-201ENST00000349062 DPF1Q92782 380 aa10.5□□□□□ -0.73
TRIM4-201ENST00000349062 SPINK13Q1W4C9 94 aa10.5□□□□□ -0.73
TRIM4-201ENST00000349062 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
TRIM4-201ENST00000349062 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
TRIM4-201ENST00000349062 GATA3P23771 443 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 JPT2Q9H910 190 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 CR1P17927 2039 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 AZU1P20160 251 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 HOXD3P31249 432 aaPredicted RBP10.49□□□□□ -0.73
TRIM4-201ENST00000349062 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 A0A087WWL8 130 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 IGLV1-40P01703 118 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 CD7P09564 240 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 UFSP1Q6NVU6 142 aa10.49□□□□□ -0.73
TRIM4-201ENST00000349062 ETDBQ3ZM63 59 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 ZC2HC1BQ5TFG8 222 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 U3KQE9 123 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 IGLC6P0CF74 106 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 PSMB8P28062 276 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 WFDC2Q14508 124 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
TRIM4-201ENST00000349062 H3BMG7 143 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 OR9G4Q8NGQ1 327 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
TRIM4-201ENST00000349062 KNCNA6PVL3 124 aa10.47□□□□□ -0.73
TRIM4-201ENST00000349062 OR11H1Q8NG94 326 aa10.47□□□□□ -0.73
TRIM4-201ENST00000349062 A0A096LNT2 108 aa10.47□□□□□ -0.73
TRIM4-201ENST00000349062 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
TRIM4-201ENST00000349062 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
TRIM4-201ENST00000349062 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
TRIM4-201ENST00000349062 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.73
TRIM4-201ENST00000349062 ZFAND2AQ8N6M9 145 aa10.46□□□□□ -0.73
TRIM4-201ENST00000349062 KLHL30-AS1Q8NEE0 82 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms