RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TMEM8BA6NDV4 472 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 PRSS29PA6NIE9 313 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 IGHV4-59P01825 116 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 RNASE4P34096 147 aaKnown RBP4.53□□□□□ -1.68
CLCN3-201ENST00000347613 FXYD2P54710 66 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 LINC00315P59091 139 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 HIST1H1AQ02539 215 aaPredicted RBP4.53□□□□□ -1.68
CLCN3-201ENST00000347613 TMEM97Q5BJF2 176 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 OR4X2Q8NGF9 303 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
CLCN3-201ENST00000347613 C7orf71A4D174 169 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 IGHG2P01859 326 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 SMIM17P0DL12 118 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 FCER1GP30273 86 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 VAMP3Q15836 100 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 FOXC2Q99958 501 aa4.53□□□□□ -1.68
CLCN3-201ENST00000347613 NAV2Q8IVL1 2488 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 IGLV1-40P01703 118 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 S100A7P31151 101 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 CRIP2P52943 208 aaPredicted RBP4.52□□□□□ -1.69
CLCN3-201ENST00000347613 CSTL1Q9H114 145 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 Q9UF83 564 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 TRRAPQ9Y4A5 3859 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 TRAV12-2A0A075B6T6 113 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 RPL11P62913 178 aaKnown RBP4.52□□□□□ -1.69
CLCN3-201ENST00000347613 CCL19Q99731 98 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 SLC50A1Q9BRV3 221 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 RHPN1-AS1Q9BWJ2 59 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 IGHV4-4A0A075B6R2 117 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 A0A096LNT2 108 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 TSHBP01222 138 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 IGKV3-20P01619 116 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 RAB9AP51151 201 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 Q8N8P6 123 aa4.52□□□□□ -1.69
CLCN3-201ENST00000347613 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
CLCN3-201ENST00000347613 DEFB112Q30KQ8 113 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 DCANP1Q8TF63 244 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 TMEM190Q8WZ59 177 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 KIF25-AS1Q9Y6Z4 181 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 KMT2BQ9UMN6 2715 aaPredicted RBP4.51□□□□□ -1.69
CLCN3-201ENST00000347613 CREBBPQ92793 2442 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 PRRC2AP48634 2157 aaKnown RBP4.51□□□□□ -1.69
CLCN3-201ENST00000347613 FLNAP21333 2647 aaKnown RBP4.51□□□□□ -1.69
CLCN3-201ENST00000347613 H3BUT2 72 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 PPBPP02775 128 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 CRYGDP07320 174 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 PRSS1P07477 247 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 EMP1P54849 157 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 TIRAPP58753 221 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 RPS20P60866 119 aaKnown RBP4.51□□□□□ -1.69
CLCN3-201ENST00000347613 HERV-K104P63124 156 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 SPANXN1Q5VSR9 72 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 UFSP1Q6NVU6 142 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 M0QXV9 152 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
CLCN3-201ENST00000347613 DPF1Q92782 380 aa4.51□□□□□ -1.69
CLCN3-201ENST00000347613 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 A0A087WWL8 130 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 FAM223BA6NKX1 122 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 NDUFA4O00483 81 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 RBMY1A1P0DJD3 496 aaKnown RBP4.5□□□□□ -1.69
CLCN3-201ENST00000347613 RBMY1CP0DJD4 496 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 RBMY1FQ15415 496 aaKnown RBP4.5□□□□□ -1.69
CLCN3-201ENST00000347613 MORN3Q6PF18 240 aaPredicted RBP4.5□□□□□ -1.69
CLCN3-201ENST00000347613 FAM223AQ8IWN6 122 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 JMJD1CQ15652 2540 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 MSMBP08118 114 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
CLCN3-201ENST00000347613 OR4C5Q8NGB2 326 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 OPRPNQ99935 248 aaPredicted RBP4.5□□□□□ -1.69
CLCN3-201ENST00000347613 NPFFR1Q9GZQ6 430 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 GAGE12BA1L429 117 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 SIVA1O15304 175 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 PSMB8P28062 276 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 LAGE3Q14657 143 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 C12orf54Q6X4T0 127 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 LINC00477Q96M19 166 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 DUX3Q96PT4 197 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 CST9LQ9H4G1 147 aa4.5□□□□□ -1.69
CLCN3-201ENST00000347613 ACANP16112 2415 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 TRAV12-3A0A0B4J271 114 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 A0A1W2PRX2 142 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 A1L4Q6 167 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 IGKCP01834 107 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 DEFB136Q30KP8 78 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 OTOGQ6ZRI0 2925 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 WNK1Q9H4A3 2382 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 DUSP14O95147 198 aaKnown RBP4.49□□□□□ -1.69
CLCN3-201ENST00000347613 PROK1P58294 105 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 APRG1Q8IVJ8 170 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 OR1N2Q8NGR9 330 aa4.49□□□□□ -1.69
CLCN3-201ENST00000347613 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms