RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.53
LMNA-201ENST00000347559 A4D1N5 150 aa11.71□□□□□ -0.53
LMNA-201ENST00000347559 TIMD4Q96H15 378 aa11.71□□□□□ -0.53
LMNA-201ENST00000347559 KAAG1Q9UBP8 84 aa11.71□□□□□ -0.53
LMNA-201ENST00000347559 IGF1P05019 195 aa11.71□□□□□ -0.54
LMNA-201ENST00000347559 ASIPP42127 132 aa11.71□□□□□ -0.54
LMNA-201ENST00000347559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.71□□□□□ -0.54
LMNA-201ENST00000347559 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 APC2O95996 2303 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 TRAV2A0A0B4J234 112 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 TRAV8-4A0A0B4J246 113 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 CRYGDP07320 174 aa11.7□□□□□ -0.54
LMNA-201ENST00000347559 TCF15Q12870 199 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 RNF5Q99942 180 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 ELANEP08246 267 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
LMNA-201ENST00000347559 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 PRR9Q5T870 116 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 PHLDA3Q9Y5J5 127 aa11.69□□□□□ -0.54
LMNA-201ENST00000347559 ATMQ13315 3056 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 IGLV4-69A0A075B6H9 119 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 BUB3O43684 328 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 CLEC3BP05452 202 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
LMNA-201ENST00000347559 DPM3Q9P2X0 92 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 LAMA5O15230 3695 aa11.68□□□□□ -0.54
LMNA-201ENST00000347559 DPH3P1Q9H4G8 78 aa11.67□□□□□ -0.54
LMNA-201ENST00000347559 EP300Q09472 2414 aaPredicted RBP11.67□□□□□ -0.54
LMNA-201ENST00000347559 LY6LH3BQJ8 138 aa11.67□□□□□ -0.54
LMNA-201ENST00000347559 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 J3QQQ9 107 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 TSHBP01222 138 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 ZNF883P0CG24 379 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 DEFB1P60022 68 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
LMNA-201ENST00000347559 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
LMNA-201ENST00000347559 SPTBN1Q01082 2364 aaKnown RBP11.65□□□□□ -0.54
LMNA-201ENST00000347559 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
LMNA-201ENST00000347559 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
LMNA-201ENST00000347559 IGFL2Q6UWQ7 119 aa11.65□□□□□ -0.54
LMNA-201ENST00000347559 PMVKQ15126 192 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 FAM57AQ8TBR7 257 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 CDX4O14627 284 aaPredicted RBP11.64□□□□□ -0.55
LMNA-201ENST00000347559 ZNRF2Q8NHG8 242 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 C16orf92Q96LL3 132 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 CHCHD5Q9BSY4 110 aa11.64□□□□□ -0.55
LMNA-201ENST00000347559 BRI3O95415 125 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 ATXN8Q156A1 80 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 PIEZO2Q9H5I5 2752 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 ZNF56Q15929 161 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 PAPPA-AS1Q5QFB9 102 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 NPBQ8NG41 125 aa11.63□□□□□ -0.55
LMNA-201ENST00000347559 CENPVL3A0A0U1RRI6 287 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 H3BMM0 161 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 E7EQL1 145 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 GNRH2O43555 120 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 FOXC1Q12948 553 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
LMNA-201ENST00000347559 OPRPNQ99935 248 aaPredicted RBP11.62□□□□□ -0.55
LMNA-201ENST00000347559 F5H697 171 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
LMNA-201ENST00000347559 LY6HO94772 140 aa11.61□□□□□ -0.55
LMNA-201ENST00000347559 LRBAP50851 2863 aa11.61□□□□□ -0.55
LMNA-201ENST00000347559 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 PRSS2P07478 247 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
LMNA-201ENST00000347559 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 PIP4P1Q86T03 277 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 DUX3Q96PT4 197 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 JPT2Q9H910 190 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 A0A0G2JNJ9 132 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 IGIPA6NJ69 53 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 AMELXQ99217 191 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 Q9UFV3 132 aa11.6□□□□□ -0.55
LMNA-201ENST00000347559 IGKV3-7A0A075B6H7 116 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 CLPSL1A2RUU4 121 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 Q6Q795 121 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 GPHB5Q86YW7 130 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 ZNF256Q9Y2P7 627 aaPredicted RBP11.59□□□□□ -0.55
LMNA-201ENST00000347559 ACACAQ13085 2346 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 A0A087WWL8 130 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 METTL26Q96S19 204 aa11.59□□□□□ -0.55
LMNA-201ENST00000347559 TRIAP1O43715 76 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 TRBV10-2A0A0K0K1G8 114 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 IGHV7-81A0A0B4J1V7 117 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 LGALS9O00182 355 aa11.58□□□□□ -0.56
LMNA-201ENST00000347559 NPC2P61916 151 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms