RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ATP6V0E1O15342 81 aa15.39■□□□□ 0.05
HDAC4-201ENST00000345617 DEFB131AP59861 70 aa15.38■□□□□ 0.05
HDAC4-201ENST00000345617 UQCRQO14949 82 aa15.38■□□□□ 0.05
HDAC4-201ENST00000345617 NREPQ16612 68 aa15.38■□□□□ 0.05
HDAC4-201ENST00000345617 DYNAPQ8N1N2 210 aa15.38■□□□□ 0.05
HDAC4-201ENST00000345617 ZNRF2Q8NHG8 242 aa15.38■□□□□ 0.05
HDAC4-201ENST00000345617 J3QLI3 93 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 SVIPQ8NHG7 77 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 LRP4O75096 1905 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 PCP2Q8IVA1 136 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 LINC00527Q9UJ94 153 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 LYNX1G3V0Z9 82 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 LYNX1P0DP58 116 aa15.37■□□□□ 0.05
HDAC4-201ENST00000345617 K7EN84 100 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 ANGP03950 147 aaKnown RBP15.36■□□□□ 0.05
HDAC4-201ENST00000345617 K7ERS5 55 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 MRPL23Q16540 153 aaKnown RBP15.36■□□□□ 0.05
HDAC4-201ENST00000345617 DEFB104AQ8WTQ1 72 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 KLK9Q9UKQ9 250 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 MDS2Q8NDY4 140 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 TTC28Q96AY4 2481 aa15.36■□□□□ 0.05
HDAC4-201ENST00000345617 IGHV7-4-1A0A0J9YVY3 117 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 LGALS9O00182 355 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 TEX36Q5VZQ5 186 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 PIFOQ8TCI5 191 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 LINC00643Q86TS7 51 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 ANXA2RQ3ZCQ2 193 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 PINLYPA6NC86 204 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 A0A0G2JNJ9 132 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 Q9UFV3 132 aa15.35■□□□□ 0.05
HDAC4-201ENST00000345617 PRR15LQ9BU68 103 aa15.34■□□□□ 0.05
HDAC4-201ENST00000345617 ETV2O00321 342 aaPredicted RBP15.34■□□□□ 0.05
HDAC4-201ENST00000345617 IGFL4Q6B9Z1 124 aa15.34■□□□□ 0.05
HDAC4-201ENST00000345617 MRPL36Q9P0J6 103 aaKnown RBP15.34■□□□□ 0.05
HDAC4-201ENST00000345617 XCL2Q9UBD3 114 aa15.34■□□□□ 0.05
HDAC4-201ENST00000345617 BRK1Q8WUW1 75 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 NXPH4O95158 308 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 NDUFV3P56181 108 aaKnown RBP15.33■□□□□ 0.04
HDAC4-201ENST00000345617 BAALCQ8WXS3 180 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 WT1-ASQ06250 92 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 B3GALT5-AS1P59052 145 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 SND1-IT1Q9HBX3 110 aa15.33■□□□□ 0.04
HDAC4-201ENST00000345617 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
HDAC4-201ENST00000345617 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
HDAC4-201ENST00000345617 CRYGBP07316 175 aa15.32■□□□□ 0.04
HDAC4-201ENST00000345617 TRBV10-2A0A0K0K1G8 114 aa15.31■□□□□ 0.04
HDAC4-201ENST00000345617 ETDCA0A1B0GVM5 59 aa15.31■□□□□ 0.04
HDAC4-201ENST00000345617 DUX4L9Q6RFH8 374 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-201ENST00000345617 CD59P13987 128 aa15.31■□□□□ 0.04
HDAC4-201ENST00000345617 CLPSL1A2RUU4 121 aa15.3■□□□□ 0.04
HDAC4-201ENST00000345617 C17orf82Q86X59 251 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-201ENST00000345617 FAM240AA0A1B0GVK7 77 aa15.3■□□□□ 0.04
HDAC4-201ENST00000345617 BRD3OSQ6XYD6 125 aa15.3■□□□□ 0.04
HDAC4-201ENST00000345617 IGHV3-16A0A0C4DH30 117 aa15.3■□□□□ 0.04
HDAC4-201ENST00000345617 MSMBP08118 114 aa15.3■□□□□ 0.04
HDAC4-201ENST00000345617 IMUPQ9GZP8 106 aa15.29■□□□□ 0.04
HDAC4-201ENST00000345617 IGHV1-58A0A0C4DH39 117 aa15.29■□□□□ 0.04
HDAC4-201ENST00000345617 XCL1P47992 114 aa15.29■□□□□ 0.04
HDAC4-201ENST00000345617 COX7B2Q8TF08 81 aa15.29■□□□□ 0.04
HDAC4-201ENST00000345617 LYRM9A8MSI8 78 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 IGHV1-69P01742 117 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRR20EP86478 221 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRR20CP86479 221 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRR20DP86480 221 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRR20BP86481 221 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRR20AP86496 221 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 FOXE3Q13461 319 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 C17orf58Q2M2W7 97 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 C15orf65H3BRN8 121 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 PRB4P10163 310 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-201ENST00000345617 C14orf132Q9NPU4 83 aa15.28■□□□□ 0.04
HDAC4-201ENST00000345617 C1orf147Q96MC9 270 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-201ENST00000345617 FHL1Q13642 323 aa15.27■□□□□ 0.04
HDAC4-201ENST00000345617 TOMM6Q96B49 74 aa15.27■□□□□ 0.04
HDAC4-201ENST00000345617 RAI1Q7Z5J4 1906 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-201ENST00000345617 A4D1N5 150 aa15.27■□□□□ 0.04
HDAC4-201ENST00000345617 FAM120AOSQ5T036 256 aa15.27■□□□□ 0.04
HDAC4-201ENST00000345617 KAAG1Q9UBP8 84 aa15.27■□□□□ 0.03
HDAC4-201ENST00000345617 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.03
HDAC4-201ENST00000345617 NDUFC2-KCTD14E9PQ53 114 aa15.27■□□□□ 0.03
HDAC4-201ENST00000345617 Q8N1Y9 231 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 TIMM17AQ99595 171 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 C11orf86A6NJI1 115 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 Q6ZUT4 128 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 C10orf105Q8TEF2 133 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 MED14OSP0DP75 135 aa15.26■□□□□ 0.03
HDAC4-201ENST00000345617 E9PLD3 99 aa15.25■□□□□ 0.03
HDAC4-201ENST00000345617 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
HDAC4-201ENST00000345617 LYPD2Q6UXB3 125 aa15.25■□□□□ 0.03
HDAC4-201ENST00000345617 TMEM61Q8N0U2 210 aa15.25■□□□□ 0.03
HDAC4-201ENST00000345617 RNASE8Q8TDE3 154 aaKnown RBP15.25■□□□□ 0.03
HDAC4-201ENST00000345617 C16orf74Q96GX8 76 aa15.25■□□□□ 0.03
HDAC4-201ENST00000345617 MLANAQ16655 118 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 ZNF581Q9P0T4 197 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 K7EQD1 137 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 COX7A2LO14548 114 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 SLX1AQ9BQ83 275 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 TRAV12-2A0A075B6T6 113 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 ELANEP08246 267 aa15.24■□□□□ 0.03
HDAC4-201ENST00000345617 LINC00205P59089 165 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms