RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 C2orf16Q68DN1 1984 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV4-1P06312 121 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 NOTCH3Q9UM47 2321 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 ATP1A1-AS1Q5TC04 95 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 LINC01356Q8N9X3 169 aa6.62□□□□□ -1.35
MCPH1-201ENST00000344683 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV1D-17A0A075B6S4 117 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 TEX36Q5VZQ5 186 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 BRCA2P51587 3418 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 USP17L23D6RBM5 183 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 COX7A2LO14548 114 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 FXYD2P54710 66 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 A6NED7 52 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 MRPS36P82909 103 aaKnown RBP6.61□□□□□ -1.35
MCPH1-201ENST00000344683 LRRC75A-AS1Q8N1F1 130 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 SAA4P35542 130 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV1-39P01597 117 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV1D-39P04432 117 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 LMO1P25800 156 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 IGF2BP2-AS1Q96M15 143 aa6.61□□□□□ -1.35
MCPH1-201ENST00000344683 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 OVOL3O00110 214 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 DIRC1Q969H9 104 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 FANCD2OSQ96PS1 177 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 MED13Q9UHV7 2174 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 CFHR1Q03591 330 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 COL6A6A6NMZ7 2263 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 FAM110AQ9BQ89 295 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 WI2-2373I1.2A0A1W2PRP0 233 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.6□□□□□ -1.35
MCPH1-201ENST00000344683 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
MCPH1-201ENST00000344683 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 TEX22C9J3V5 150 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 TIRAPP58753 221 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 BPY2O14599 106 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 UBE2E1P51965 193 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 H3BUA1 57 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 IGLV3-19P01714 112 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 MLANAQ16655 118 aa6.6□□□□□ -1.35
MCPH1-201ENST00000344683 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 FAM120AOSQ5T036 256 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 ATG2AQ2TAZ0 1938 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 H0Y9J4 135 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 IGLC6P0CF74 106 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 WFDC11Q8NEX6 87 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 PKDREJQ9NTG1 2253 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 ZDBF2Q9HCK1 2354 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 IGHV4-4A0A075B6R2 117 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.59□□□□□ -1.35
MCPH1-201ENST00000344683 IGKV2-29A2NJV5 120 aaPredicted RBP6.59□□□□□ -1.35
MCPH1-201ENST00000344683 ATP6V0E1O15342 81 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 IGHV1-69P01742 117 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 ELANEP08246 267 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 VPREB1P12018 145 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 NDUFA11Q86Y39 141 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 C3orf56Q8N813 242 aa6.59□□□□□ -1.35
MCPH1-201ENST00000344683 KIAA1671Q9BY89 1806 aa6.59□□□□□ -1.36
MCPH1-201ENST00000344683 Q8N1Y9 231 aa6.59□□□□□ -1.36
MCPH1-201ENST00000344683 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 LYNX1G3V0Z9 82 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 LYNX1P0DP58 116 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 USF3Q68DE3 2245 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 IGKV2D-24A0A075B6R9 120 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 K7EQD1 137 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 LECT2O14960 151 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 CD59P13987 128 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 C16orf54Q6UWD8 224 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 TCL1BO95988 128 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 C20orf197Q8N268 126 aa6.58□□□□□ -1.36
MCPH1-201ENST00000344683 WISP1O95388 367 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 FOXL2NBQ6ZUU3 175 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 FGF23Q9GZV9 251 aaPredicted RBP6.57□□□□□ -1.36
MCPH1-201ENST00000344683 CEP192Q8TEP8 1941 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 CLPSP04118 112 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 COLQQ9Y215 455 aaPredicted RBP6.57□□□□□ -1.36
MCPH1-201ENST00000344683 CAMK2N2Q96S95 79 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 TIMM17AQ99595 171 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 C16orf74Q96GX8 76 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 GATA4P43694 442 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 MIAQ16674 131 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 TNCP24821 2201 aa6.57□□□□□ -1.36
MCPH1-201ENST00000344683 HIST2H2BDQ6DRA6 164 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 Q8TCH9 128 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 BLCAPP62952 87 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 SDIM1Q6ZPB5 146 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 PCNX1Q96RV3 2341 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 PIK3CD-AS1Q5SR53 167 aa6.56□□□□□ -1.36
MCPH1-201ENST00000344683 TIMM17BO60830 172 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms