RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 TRAV8-2A0A0B4J237 113 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 H3BVH4 76 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 CNTFRP26992 372 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 PSMB2P49721 201 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 ZNF816Q0VGE8 651 aaPredicted RBP3.58□□□□□ -1.84
VAV3-201ENST00000343258 TMEM14EPQ6UXP3 125 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
VAV3-201ENST00000343258 MRPL32Q9BYC8 188 aaKnown RBP3.58□□□□□ -1.84
VAV3-201ENST00000343258 MRPL20Q9BYC9 149 aaKnown RBP3.58□□□□□ -1.84
VAV3-201ENST00000343258 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 IFI27L2Q9H2X8 130 aa3.58□□□□□ -1.84
VAV3-201ENST00000343258 HEYLQ9NQ87 328 aaPredicted RBP3.58□□□□□ -1.84
VAV3-201ENST00000343258 TRAV8-1A0A0A6YYK1 113 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 HIGD1CA8MV81 97 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 SAA2P0DJI9 122 aaPredicted RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 FCER1GP30273 86 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 KIR2DS2P43631 304 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 CACNG7P62955 275 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
VAV3-201ENST00000343258 RRN3P1Q2M238 152 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C9orf153Q5TBE3 101 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 Q6Q795 121 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 SFTA2Q6UW10 78 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 ZNF329Q86UD4 541 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 Q8N2B8 174 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C10orf126Q8N4M7 172 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 LINC00311Q8N616 119 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 FAM110DQ8TAY7 271 aaPredicted RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 AP5S1Q9NUS5 200 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 A0A1W2PRX2 142 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 ORM2P19652 201 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 GCHFRP30047 84 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 HERVK_113P63121 156 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 NSUN5P1Q3KNT7 163 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C18orf65Q6ZTR6 163 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 H2BFWTQ7Z2G1 175 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 Q8N6K4 173 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C5orf56Q8N8D9 126 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C11orf52Q96A22 123 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 DUX3Q96PT4 197 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 PRSS22Q9GZN4 317 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 KLK5Q9Y337 293 aaPredicted RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 AMMECR1Q9Y4X0 333 aaPredicted RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 SORL1Q92673 2214 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 LOC107984156A0A0G2JMH3 177 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 NCBP2LA6PVI3 153 aaKnown RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 GGTLC3B5MD39 225 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 ZNF137PP52743 207 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 RPL30P62888 115 aaKnown RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 ARL17AQ8IVW1 177 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 C8orf31Q8N9H6 132 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 Q8N9W7 124 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 GATD1Q8NB37 220 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 FLYWCH2Q96CP2 140 aaKnown RBP3.57□□□□□ -1.84
VAV3-201ENST00000343258 LINC00477Q96M19 166 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 NABP2Q9BQ15 211 aa3.57□□□□□ -1.84
VAV3-201ENST00000343258 TRBV25-1A0A075B6N4 114 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGKV1-5P01602 117 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGLV2-14P01704 120 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGLV2-8P01709 118 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 APOHP02749 345 aaPredicted RBP3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGKV1-16P04430 117 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 ASIPP42127 132 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 HBBP68871 147 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 EBI3Q14213 229 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 ZC2HC1BQ5TFG8 222 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 ZNF833PQ6ZTB9 187 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 HIGD1BQ9P298 99 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 MOB4Q9Y3A3 225 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 COL7A1Q02388 2944 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 IGKV2D-26A0A0A0MRZ7 120 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 A0A1B0GX51 115 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 PMS2P5A8MQ11 134 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 A8MWV9 139 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 TUSC2O75896 110 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 DUSP14O95147 198 aaKnown RBP3.56□□□□□ -1.84
VAV3-201ENST00000343258 ORM1P02763 201 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 NDPQ00604 133 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 LGALS9BQ3B8N2 356 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 MIC13Q5XKP0 118 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 LGALS9CQ6DKI2 356 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 ZFP2Q6ZN57 461 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 ANKRD29Q8N6D5 301 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 C15orf53Q8NAA6 179 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 PRSS3P2Q8NHM4 247 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 RNF125Q96EQ8 232 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 S1PR3Q99500 378 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 TPSG1Q9NRR2 321 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 PKIGQ9Y2B9 76 aa3.56□□□□□ -1.84
VAV3-201ENST00000343258 FAM236AA0A1B0GUQ0 79 aa3.55□□□□□ -1.84
VAV3-201ENST00000343258 FAM236BA0A1B0GV22 79 aa3.55□□□□□ -1.84
VAV3-201ENST00000343258 TINCRA0A1B0GVN0 87 aa3.55□□□□□ -1.84
VAV3-201ENST00000343258 LINC00473A8K010 186 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms