RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
SYDE1-201ENST00000342784 MBD3L4A6NDZ8 208 aaPredicted RBP10.64□□□□□ -0.71
SYDE1-201ENST00000342784 MBD3L3A6NE82 208 aaPredicted RBP10.64□□□□□ -0.71
SYDE1-201ENST00000342784 MBD3L5A6NJ08 208 aaPredicted RBP10.64□□□□□ -0.71
SYDE1-201ENST00000342784 ZNF491Q8N8L2 437 aa10.64□□□□□ -0.71
SYDE1-201ENST00000342784 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
SYDE1-201ENST00000342784 UBE2D1P51668 147 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 CCL8P80075 99 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 IGFL4Q6B9Z1 124 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 C9orf106Q8NAJ2 232 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 FDCSPQ8NFU4 85 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 USP9XQ93008 2570 aaPredicted RBP10.63□□□□□ -0.71
SYDE1-201ENST00000342784 LRRC75A-AS1Q8N1F1 130 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 MDS2Q8NDY4 140 aa10.63□□□□□ -0.71
SYDE1-201ENST00000342784 H7C2G1 150 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 WNK1Q9H4A3 2382 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 I3L2K1 104 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 IGHV1-46P01743 117 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 NDUFA11Q86Y39 141 aa10.62□□□□□ -0.71
SYDE1-201ENST00000342784 TRGV3P03979 118 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 SPANXN1Q5VSR9 72 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 NDUFB3O43676 98 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 CD40P25942 277 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 SEC61GP60059 68 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 KLHL30-AS1Q8NEE0 82 aa10.61□□□□□ -0.71
SYDE1-201ENST00000342784 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 J3QLI3 93 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 Q1RN00 199 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 MRAPQ8TCY5 172 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 ABCA12Q86UK0 2595 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 HERVK_113P61574 105 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
SYDE1-201ENST00000342784 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 HERVK_113P63121 156 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 SLC25A15Q9Y619 301 aa10.6□□□□□ -0.71
SYDE1-201ENST00000342784 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 TMEM155Q4W5P6 130 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 HLA-DMBP28068 263 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 ORMDL2Q53FV1 153 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 Q6Q795 121 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 CTSZQ9UBR2 303 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 PRO1854Q9UHT4 67 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 ZANQ9Y493 2812 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 CNFNQ9BYD5 112 aa10.59□□□□□ -0.71
SYDE1-201ENST00000342784 MRPS12O15235 138 aaKnown RBP10.58□□□□□ -0.72
SYDE1-201ENST00000342784 CD7P09564 240 aa10.58□□□□□ -0.72
SYDE1-201ENST00000342784 ERCC8Q13216 396 aa10.58□□□□□ -0.72
SYDE1-201ENST00000342784 LINC00311Q8N616 119 aa10.58□□□□□ -0.72
SYDE1-201ENST00000342784 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
SYDE1-201ENST00000342784 ABCA2Q9BZC7 2435 aa10.58□□□□□ -0.72
SYDE1-201ENST00000342784 FLNCQ14315 2725 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 K7EIM0 57 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 HES1Q14469 280 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 SBSPONQ8IVN8 264 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 NDUFA7O95182 113 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 C9orf153Q5TBE3 101 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 DKK4Q9UBT3 224 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 C3orf36Q3SXR2 165 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 TRPT1Q86TN4 253 aaKnown RBP10.57□□□□□ -0.72
SYDE1-201ENST00000342784 NRACQ8N912 160 aa10.57□□□□□ -0.72
SYDE1-201ENST00000342784 LRRK2Q5S007 2527 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 TEX36Q5VZQ5 186 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 CCL17Q92583 94 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 CFC1BP0CG36 223 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 CFC1P0CG37 223 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 Q8N1Y9 231 aa10.56□□□□□ -0.72
SYDE1-201ENST00000342784 IGLV3-9A0A075B6K5 115 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 COX8CQ7Z4L0 72 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 TIMD4Q96H15 378 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 BEX4Q9NWD9 120 aaPredicted RBP10.55□□□□□ -0.72
SYDE1-201ENST00000342784 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 TRAV2A0A0B4J234 112 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 IGHV4-39P01824 125 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 C22orf34Q6ZV56 151 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 BAALCQ8WXS3 180 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
SYDE1-201ENST00000342784 CRIP2P52943 208 aaPredicted RBP10.54□□□□□ -0.72
SYDE1-201ENST00000342784 GFRALQ6UXV0 394 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 A0A0J9YY99 117 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 A0A1B0GX51 115 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 DUSP14O95147 198 aaKnown RBP10.54□□□□□ -0.72
SYDE1-201ENST00000342784 COX7A1P24310 79 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 DYNAPQ8N1N2 210 aa10.54□□□□□ -0.72
SYDE1-201ENST00000342784 RAI1Q7Z5J4 1906 aaPredicted RBP10.54□□□□□ -0.72
SYDE1-201ENST00000342784 IGHV1-8P0DP01 117 aa10.53□□□□□ -0.72
SYDE1-201ENST00000342784 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
SYDE1-201ENST00000342784 C1orf43Q9BWL3 253 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms