RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SORL1Q92673 2214 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 NOTCH2Q04721 2471 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 A8MTW9 85 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 PPBPP02775 128 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 IFI27P40305 119 aaPredicted RBP14.8□□□□□ -0.04
RTN1-202ENST00000342503 FXYD7P58549 80 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 FA2HQ7L5A8 372 aa14.8□□□□□ -0.04
RTN1-202ENST00000342503 C3orf79P0CE67 100 aa14.79□□□□□ -0.04
RTN1-202ENST00000342503 RBMY1BA6NDE4 496 aaKnown RBP14.78□□□□□ -0.04
RTN1-202ENST00000342503 RBMY1EA6NEQ0 496 aaKnown RBP14.78□□□□□ -0.04
RTN1-202ENST00000342503 CD7P09564 240 aa14.78□□□□□ -0.04
RTN1-202ENST00000342503 RBMY1DP0C7P1 496 aaKnown RBP14.78□□□□□ -0.04
RTN1-202ENST00000342503 TDRG1Q3Y452 100 aa14.78□□□□□ -0.04
RTN1-202ENST00000342503 Q8N976 141 aa14.78□□□□□ -0.04
RTN1-202ENST00000342503 GATA1P15976 413 aaPredicted RBP14.77□□□□□ -0.05
RTN1-202ENST00000342503 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
RTN1-202ENST00000342503 MUC4Q99102 2169 aa14.76□□□□□ -0.05
RTN1-202ENST00000342503 IGHV1OR15-1A0A075B7D0 117 aa14.76□□□□□ -0.05
RTN1-202ENST00000342503 LAMTOR2Q9Y2Q5 125 aa14.76□□□□□ -0.05
RTN1-202ENST00000342503 WNK1Q9H4A3 2382 aa14.76□□□□□ -0.05
RTN1-202ENST00000342503 CRLF1O75462 422 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 TNFRSF6BO95407 300 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 PRO1933Q9H354 126 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 IGHV3-16A0A0C4DH30 117 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 CRXO43186 299 aaPredicted RBP14.75□□□□□ -0.05
RTN1-202ENST00000342503 SAP30O75446 220 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 NXPH4O95158 308 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 ODF3L2Q3SX64 289 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 NDUFA11Q86Y39 141 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 ZNF664Q8N3J9 261 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 MAP1LC3AQ9H492 121 aa14.75□□□□□ -0.05
RTN1-202ENST00000342503 TRAV26-2A0A0B4J265 109 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 LEPROTL1O95214 131 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 RBMY1A1P0DJD3 496 aaKnown RBP14.74□□□□□ -0.05
RTN1-202ENST00000342503 RBMY1CP0DJD4 496 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 PKIAP61925 76 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 RBMY1FQ15415 496 aaKnown RBP14.74□□□□□ -0.05
RTN1-202ENST00000342503 LINC00173Q6ZV60 143 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 Q8N1Y9 231 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 DPH3P1Q9H4G8 78 aa14.74□□□□□ -0.05
RTN1-202ENST00000342503 SETXQ7Z333 2677 aaKnown RBP14.73□□□□□ -0.05
RTN1-202ENST00000342503 TEX43Q6ZNM6 134 aa14.73□□□□□ -0.05
RTN1-202ENST00000342503 C14orf178Q8N769 122 aaPredicted RBP14.73□□□□□ -0.05
RTN1-202ENST00000342503 OR2K2Q8NGT1 345 aa14.73□□□□□ -0.05
RTN1-202ENST00000342503 MDFICQ9P1T7 246 aa14.73□□□□□ -0.05
RTN1-202ENST00000342503 BTF3P20290 206 aaKnown RBP14.72□□□□□ -0.05
RTN1-202ENST00000342503 C9orf85Q96MD7 179 aa14.72□□□□□ -0.05
RTN1-202ENST00000342503 NRACQ8N912 160 aa14.72□□□□□ -0.05
RTN1-202ENST00000342503 MRAP2Q96G30 205 aa14.72□□□□□ -0.05
RTN1-202ENST00000342503 AP1S3Q96PC3 154 aa14.72□□□□□ -0.05
RTN1-202ENST00000342503 LINC00587B1AMM8 73 aa14.71□□□□□ -0.05
RTN1-202ENST00000342503 HIVEP1P15822 2718 aa14.71□□□□□ -0.05
RTN1-202ENST00000342503 NSD1Q96L73 2696 aaPredicted RBP14.7□□□□□ -0.06
RTN1-202ENST00000342503 SETD2Q9BYW2 2564 aaPredicted RBP14.7□□□□□ -0.06
RTN1-202ENST00000342503 A0A096LNJ9 63 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 OR11H12B2RN74 326 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 TSTD3H0UI37 97 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 IGLV1-51P01701 117 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 MGPP08493 103 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 TMEM70Q9BUB7 260 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 FN1P02751 2386 aaKnown RBP14.69□□□□□ -0.06
RTN1-202ENST00000342503 TRGV11A0A075B6L2 103 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 CBY3A6NI87 242 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 SPATA12Q7Z6I5 190 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 HSPB8Q9UJY1 196 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 KIF25-AS1Q9Y6Z4 181 aa14.69□□□□□ -0.06
RTN1-202ENST00000342503 LINC01546A6NGU7 62 aa14.68□□□□□ -0.06
RTN1-202ENST00000342503 CLUHP3Q96NS8 147 aa14.68□□□□□ -0.06
RTN1-202ENST00000342503 JPT2Q9H910 190 aa14.68□□□□□ -0.06
RTN1-202ENST00000342503 NXT2Q9NPJ8 142 aaKnown RBP14.68□□□□□ -0.06
RTN1-202ENST00000342503 PRSS47A8MTI9 375 aa14.67□□□□□ -0.06
RTN1-202ENST00000342503 STHQ8IWL8 128 aa14.67□□□□□ -0.06
RTN1-202ENST00000342503 Q8N8P6 123 aa14.67□□□□□ -0.06
RTN1-202ENST00000342503 IGLV2-18A0A075B6J9 118 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 PF4P02776 101 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 POM121L12Q8N7R1 296 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 SYS1-DBNDD2H3BUS1 97 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 SMIM17P0DL12 118 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 LINC00315P59091 139 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 SYT8Q8NBV8 401 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 VAMP8Q9BV40 100 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 MAP1LC3CQ9BXW4 147 aa14.66□□□□□ -0.06
RTN1-202ENST00000342503 HBDP02042 147 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 HTN1P15515 57 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 CMC4P56277 68 aaPredicted RBP14.65□□□□□ -0.06
RTN1-202ENST00000342503 TRPT1Q86TN4 253 aaKnown RBP14.65□□□□□ -0.06
RTN1-202ENST00000342503 DEFB125Q8N687 156 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 LINC00482Q8N8I6 264 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 RASL10AQ92737 203 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 ZNF747Q9BV97 191 aa14.65□□□□□ -0.06
RTN1-202ENST00000342503 KIR2DL5BA0A0G2JN68 375 aa14.64□□□□□ -0.07
RTN1-202ENST00000342503 KIR2DL5BA0A0G2JPC4 375 aa14.64□□□□□ -0.07
RTN1-202ENST00000342503 INSP01308 110 aa14.64□□□□□ -0.07
RTN1-202ENST00000342503 KIR2DL5AQ8N109 375 aa14.64□□□□□ -0.07
RTN1-202ENST00000342503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.64□□□□□ -0.07
RTN1-202ENST00000342503 PAM16Q9Y3D7 125 aa14.64□□□□□ -0.07
RTN1-202ENST00000342503 A0A087WWL8 130 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 PRM2P04554 102 aa14.63□□□□□ -0.07
RTN1-202ENST00000342503 ATOH7Q8N100 152 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms