RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 COX8CQ7Z4L0 72 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 ZNF479Q96JC4 524 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 RYR3Q15413 4870 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 ZNF727A8MUV8 499 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 C9orf85Q96MD7 179 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 SPXQ9BT56 116 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 NDUFAF3Q9BU61 184 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 JPT2Q9H910 190 aa9.29□□□□□ -0.92
TUBD1-202ENST00000340993 PEA15Q15121 130 aa9.28□□□□□ -0.92
TUBD1-202ENST00000340993 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 P01737 135 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 POM121L12Q8N7R1 296 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 APLNQ9ULZ1 77 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 PHLDA3Q9Y5J5 127 aa9.27□□□□□ -0.92
TUBD1-202ENST00000340993 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.93
TUBD1-202ENST00000340993 A0A096LPF7 62 aa9.27□□□□□ -0.93
TUBD1-202ENST00000340993 LGALS9BQ3B8N2 356 aa9.27□□□□□ -0.93
TUBD1-202ENST00000340993 C19orf71A6NCJ1 209 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 NUDT10Q8NFP7 164 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 RASL10AQ92737 203 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 RYR2Q92736 4967 aa9.26□□□□□ -0.93
TUBD1-202ENST00000340993 A0A087WWL8 130 aa9.25□□□□□ -0.93
TUBD1-202ENST00000340993 ADIRFQ15847 76 aa9.25□□□□□ -0.93
TUBD1-202ENST00000340993 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
TUBD1-202ENST00000340993 SAMD10Q9BYL1 202 aa9.25□□□□□ -0.93
TUBD1-202ENST00000340993 IL36BQ9NZH7 164 aa9.25□□□□□ -0.93
TUBD1-202ENST00000340993 ERVFC1-1P60608 527 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 CFAP126Q5VTH2 177 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 TRAV4A0A0B4J268 109 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 FHL2Q14192 279 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
TUBD1-202ENST00000340993 PAX4O43316 350 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 SOHLH1Q5JUK2 328 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 SYT8Q8NBV8 401 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 SMIM12Q96EX1 92 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 RPP21Q9H633 154 aaKnown RBP9.23□□□□□ -0.93
TUBD1-202ENST00000340993 HHLA3Q9XRX5 114 aa9.23□□□□□ -0.93
TUBD1-202ENST00000340993 LCE6AA0A183 80 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 GATCO43716 136 aaKnown RBP9.22□□□□□ -0.93
TUBD1-202ENST00000340993 FER1L6-AS1Q8NA97 138 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 BIN3Q9NQY0 253 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 RS1O15537 224 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 RPL23P62829 140 aaKnown RBP9.22□□□□□ -0.93
TUBD1-202ENST00000340993 TMEM241Q24JQ0 296 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 ZFP82Q8N141 532 aa9.22□□□□□ -0.93
TUBD1-202ENST00000340993 CRYBA4P53673 196 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 Q6ZSN1 163 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 SCRT2Q9NQ03 307 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 MSRB1Q9NZV6 116 aa9.21□□□□□ -0.94
TUBD1-202ENST00000340993 GYPEP15421 78 aa9.2□□□□□ -0.94
TUBD1-202ENST00000340993 DNLZQ5SXM8 178 aa9.2□□□□□ -0.94
TUBD1-202ENST00000340993 C18orf15Q96N68 181 aa9.2□□□□□ -0.94
TUBD1-202ENST00000340993 NAT8Q9UHE5 227 aa9.2□□□□□ -0.94
TUBD1-202ENST00000340993 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
TUBD1-202ENST00000340993 XKRY2A2RUG3 117 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 RPS20P60866 119 aaKnown RBP9.19□□□□□ -0.94
TUBD1-202ENST00000340993 C15orf53Q8NAA6 179 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 PGLYRP4Q96LB8 373 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 P0DMU3 169 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 ZNF56Q15929 161 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 C14orf178Q8N769 122 aaPredicted RBP9.19□□□□□ -0.94
TUBD1-202ENST00000340993 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 ISOC2Q96AB3 205 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 FAM210BQ96KR6 192 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 Q9UF83 564 aa9.19□□□□□ -0.94
TUBD1-202ENST00000340993 A8MWV9 139 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 SNAI2O43623 268 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 MGPP08493 103 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 IGLC6P0CF74 106 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 GATA1P15976 413 aaPredicted RBP9.18□□□□□ -0.94
TUBD1-202ENST00000340993 FAM74A3Q4VXF1 159 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 ICOSQ9Y6W8 199 aa9.18□□□□□ -0.94
TUBD1-202ENST00000340993 K7EQD1 137 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 M0R2N4 97 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 TCTAP57738 103 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 SFRP2Q96HF1 295 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms