RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 VCX2Q9H322 139 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 GAS8-AS1O95177 125 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 TGFAP01135 160 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 FAM74A4Q5TZK3 123 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 TMEM219Q86XT9 240 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 PIMREGQ9BSJ6 248 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 DMXL1Q9Y485 3027 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 F8W735 103 aaPredicted RBP7.25□□□□□ -1.25
TRERF1-201ENST00000340840 IGHV3-11P01762 117 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 EBI3Q14213 229 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 SH2D6Q7Z4S9 175 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 ZMAT4Q9H898 229 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 LCNL1Q6ZST4 164 aa7.25□□□□□ -1.25
TRERF1-201ENST00000340840 PRRC2AP48634 2157 aaKnown RBP7.25□□□□□ -1.25
TRERF1-201ENST00000340840 PRSS29PA6NIE9 313 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 ZNF56Q15929 161 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 ANXA2RQ3ZCQ2 193 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 C2CD3Q4AC94 2353 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 DOPEY1Q5JWR5 2465 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 AKAP13Q12802 2813 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 VCYO14598 125 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 LY6EQ16553 131 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 FBXL19-AS1Q494R0 122 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 ZFAND3Q9H8U3 227 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 MYO9AB2RTY4 2548 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 USP34Q70CQ2 3546 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 A8MWV9 139 aa7.24□□□□□ -1.25
TRERF1-201ENST00000340840 CD7P09564 240 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 Q8N6K4 173 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 MAPKAPK5-AS1Q8N8E1 139 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 NBEAQ8NFP9 2946 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 H7C2G1 150 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 MAPK1IP1LQ8NDC0 245 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 ITLN2Q8WWU7 325 aaPredicted RBP7.23□□□□□ -1.25
TRERF1-201ENST00000340840 ZNF256Q9Y2P7 627 aaPredicted RBP7.23□□□□□ -1.25
TRERF1-201ENST00000340840 USP24Q9UPU5 2620 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 NRACQ8N912 160 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 NRGNQ92686 78 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 TP53TG1Q9Y2A0 90 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 NOTCH3Q9UM47 2321 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 CENPVL3A0A0U1RRI6 287 aa7.23□□□□□ -1.25
TRERF1-201ENST00000340840 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
TRERF1-201ENST00000340840 NDUFA4O00483 81 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 EMP1P54849 157 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 PMVKQ15126 192 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 CCDC140Q96MF4 163 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 SPANXB1Q9NS25 103 aaPredicted RBP7.22□□□□□ -1.25
TRERF1-201ENST00000340840 C11orf21Q9P2W6 132 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 FRYQ5TBA9 3013 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 CKS1BP61024 79 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 CHD6Q8TD26 2715 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 Q5PR19 223 aa7.22□□□□□ -1.25
TRERF1-201ENST00000340840 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.25
TRERF1-201ENST00000340840 IGHV1-69DA0A0B4J2H0 117 aa7.21□□□□□ -1.25
TRERF1-201ENST00000340840 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.25
TRERF1-201ENST00000340840 TMEM141Q96I45 108 aa7.21□□□□□ -1.25
TRERF1-201ENST00000340840 ATP6V0BQ99437 205 aa7.21□□□□□ -1.25
TRERF1-201ENST00000340840 SIRPDQ9H106 197 aa7.21□□□□□ -1.25
TRERF1-201ENST00000340840 SPRY2O43597 315 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 IGHG4P01861 327 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 LGALS1P09382 135 aaKnown RBP7.21□□□□□ -1.26
TRERF1-201ENST00000340840 RHPN1-AS1Q9BWJ2 59 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 BPESC1Q9GZL8 116 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 BAHCC1Q9P281 2608 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 IGHV7-4-1A0A0J9YVY3 117 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 OVOL3O00110 214 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 SNRPD3P62318 126 aaKnown RBP7.21□□□□□ -1.26
TRERF1-201ENST00000340840 ADORA2A-AS1P86434 159 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 BAALCQ8WXS3 180 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 ACANP16112 2415 aa7.21□□□□□ -1.26
TRERF1-201ENST00000340840 IGHV4-4A0A075B6R2 117 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 TMEM262E9PQX1 116 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 PRSS2P07478 247 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
TRERF1-201ENST00000340840 TRAV8-2A0A0B4J237 113 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 IGKV3-20P01619 116 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 F8P00451 2351 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
TRERF1-201ENST00000340840 IGLV2-18A0A075B6J9 118 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 A0A087WWL8 130 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 GNRH2O43555 120 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 COX6CP09669 75 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 SPINK8P0C7L1 97 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 SRD5A1P18405 259 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 Q96MF0 132 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 RNF223E7ERA6 249 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 LINC01619G3V211 115 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 NEXN-AS1Q8NBZ9 246 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 RASL10AQ92737 203 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 C1QTNF4Q9BXJ3 329 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
TRERF1-201ENST00000340840 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms