RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PGPEP1LA6NFU8 196 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 KRBOX1C9JBD0 128 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 C9JCJ5 164 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
VAPA-201ENST00000340541 ZNF876PQ49A33 203 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 DNLZQ5SXM8 178 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 FAM162BQ5T6X4 162 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 C1orf134Q5TEV5 83 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 NHLRC2Q8NBF2 726 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 OR4C5Q8NGB2 326 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
VAPA-201ENST00000340541 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
VAPA-201ENST00000340541 ORM1P02763 201 aa10.61□□□□□ -0.71
VAPA-201ENST00000340541 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
VAPA-201ENST00000340541 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
VAPA-201ENST00000340541 ICOSQ9Y6W8 199 aa10.61□□□□□ -0.71
VAPA-201ENST00000340541 B4DEV8 164 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 M0R036 132 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 RS1O15537 224 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 NKX2-5P52952 324 aaPredicted RBP10.6□□□□□ -0.71
VAPA-201ENST00000340541 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 DERL1Q9BUN8 251 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 IL36BQ9NZH7 164 aa10.6□□□□□ -0.71
VAPA-201ENST00000340541 MRPS16Q9Y3D3 137 aaKnown RBP10.6□□□□□ -0.71
VAPA-201ENST00000340541 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
VAPA-201ENST00000340541 TEX46H3BTG2 121 aa10.59□□□□□ -0.71
VAPA-201ENST00000340541 GATA1P15976 413 aaPredicted RBP10.59□□□□□ -0.71
VAPA-201ENST00000340541 ASIPP42127 132 aa10.59□□□□□ -0.71
VAPA-201ENST00000340541 RPL35P42766 123 aaKnown RBP10.59□□□□□ -0.71
VAPA-201ENST00000340541 BAGE2Q86Y30 109 aa10.59□□□□□ -0.71
VAPA-201ENST00000340541 GRIFINA4D1Z8 144 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 H3BVH4 76 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 K7EQD1 137 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 S100A4P26447 101 aaKnown RBP10.58□□□□□ -0.72
VAPA-201ENST00000340541 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
VAPA-201ENST00000340541 PIK3CD-AS1Q5SR53 167 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 TXNDC17Q9BRA2 123 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 Q9H8V8 135 aa10.58□□□□□ -0.72
VAPA-201ENST00000340541 ARMS2P0C7Q2 107 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 BCL2P10415 239 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 GYPEP15421 78 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
VAPA-201ENST00000340541 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 PKD1P98161 4303 aa10.57□□□□□ -0.72
VAPA-201ENST00000340541 TMSB15BA0A087X1C1 80 aa10.56□□□□□ -0.72
VAPA-201ENST00000340541 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
VAPA-201ENST00000340541 CIDEAO60543 219 aa10.56□□□□□ -0.72
VAPA-201ENST00000340541 IGLV2-8P01709 118 aa10.56□□□□□ -0.72
VAPA-201ENST00000340541 LYPD5Q6UWN5 251 aa10.56□□□□□ -0.72
VAPA-201ENST00000340541 IFNA1P01562 189 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
VAPA-201ENST00000340541 CENPWQ5EE01 88 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 UFSP1Q6NVU6 142 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 LYPD6BQ8NI32 183 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 PARLQ9H300 379 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 JPT2Q9H910 190 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 VAX2Q9UIW0 290 aa10.55□□□□□ -0.72
VAPA-201ENST00000340541 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 A8MWV9 139 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 PDE6DO43924 150 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 SRIP30626 198 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 Q6ZSN1 163 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
VAPA-201ENST00000340541 SAMD10Q9BYL1 202 aa10.54□□□□□ -0.72
VAPA-201ENST00000340541 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
VAPA-201ENST00000340541 CXCL1P09341 107 aa10.53□□□□□ -0.72
VAPA-201ENST00000340541 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
VAPA-201ENST00000340541 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
VAPA-201ENST00000340541 NXPH4O95158 308 aa10.52□□□□□ -0.73
VAPA-201ENST00000340541 MGST1P10620 155 aaKnown RBP10.52□□□□□ -0.73
VAPA-201ENST00000340541 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
VAPA-201ENST00000340541 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
VAPA-201ENST00000340541 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
VAPA-201ENST00000340541 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
VAPA-201ENST00000340541 A0A1W2PPQ1 181 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 RHOHQ15669 191 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 SMIM12Q96EX1 92 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 SFRP2Q96HF1 295 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
VAPA-201ENST00000340541 PHLDA3Q9Y5J5 127 aa10.51□□□□□ -0.73
VAPA-201ENST00000340541 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 M0R381 172 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 SIVA1O15304 175 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 SNAI2O43623 268 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 CRYGDP07320 174 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 GNG4P50150 75 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 PRADC1Q9BSG0 188 aa10.5□□□□□ -0.73
VAPA-201ENST00000340541 LINC00694P0DN24 101 aa10.49□□□□□ -0.73
VAPA-201ENST00000340541 TIRAPP58753 221 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms