RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SH3BGRL3Q9H299 93 aa10.46□□□□□ -0.73
LINC01116-202ENST00000339037 TRAV8-6A0A0B4J262 113 aa10.45□□□□□ -0.74
LINC01116-202ENST00000339037 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
LINC01116-202ENST00000339037 GCHFRP30047 84 aa10.45□□□□□ -0.74
LINC01116-202ENST00000339037 SUN5Q8TC36 379 aa10.45□□□□□ -0.74
LINC01116-202ENST00000339037 FBLL1A6NHQ2 334 aaKnown RBP10.44□□□□□ -0.74
LINC01116-202ENST00000339037 TCRAP04437 139 aa10.44□□□□□ -0.74
LINC01116-202ENST00000339037 PFN1P07737 140 aaKnown RBP10.44□□□□□ -0.74
LINC01116-202ENST00000339037 ZNF80P51504 273 aaPredicted RBP10.44□□□□□ -0.74
LINC01116-202ENST00000339037 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
LINC01116-202ENST00000339037 C5orf17Q8NAS9 161 aa10.44□□□□□ -0.74
LINC01116-202ENST00000339037 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
LINC01116-202ENST00000339037 RNF222A6NCQ9 220 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 GGTLC3B5MD39 225 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 GIPP09681 153 aaPredicted RBP10.43□□□□□ -0.74
LINC01116-202ENST00000339037 SERF2P84101 59 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 ASB13Q8WXK3 278 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 KCNS1Q96KK3 526 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 C11orf21Q9P2W6 132 aa10.43□□□□□ -0.74
LINC01116-202ENST00000339037 SERTM2A0A1B0GWG4 89 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 RPL7L1Q6DKI1 246 aaKnown RBP10.42□□□□□ -0.74
LINC01116-202ENST00000339037 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 NDFIP1Q9BT67 221 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 PSG8Q9UQ74 426 aa10.42□□□□□ -0.74
LINC01116-202ENST00000339037 CXorf1O96002 111 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 GCGP01275 180 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 MBP02144 154 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 C1QBP02746 253 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 RHOHQ15669 191 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 ZNF876PQ49A33 203 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 TNFSF18Q9UNG2 199 aa10.41□□□□□ -0.74
LINC01116-202ENST00000339037 FXYD6-FXYD2A0A087WZ82 144 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 TRBV6-4A0A1B0GX49 114 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 FLI1Q01543 452 aaPredicted RBP10.4□□□□□ -0.74
LINC01116-202ENST00000339037 LAGE3Q14657 143 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 ZNF726P1Q15940 193 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 LELP1Q5T871 98 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
LINC01116-202ENST00000339037 ACTR3CQ9C0K3 210 aaPredicted RBP10.4□□□□□ -0.74
LINC01116-202ENST00000339037 TMEM167BQ9NRX6 74 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 EPDR1Q9UM22 224 aa10.4□□□□□ -0.74
LINC01116-202ENST00000339037 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 IGHV3-73A0A0B4J1V6 119 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 K7EQM0 130 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 CIDEAO60543 219 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
LINC01116-202ENST00000339037 DPPA3Q6W0C5 159 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 PRNTQ86SH4 94 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 CYB561D1Q8N8Q1 229 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
LINC01116-202ENST00000339037 G3V3Q6 166 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 TAAR5O14804 337 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 ZFP69Q49AA0 526 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 OR2T35Q8NGX2 323 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 C9orf85Q96MD7 179 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
LINC01116-202ENST00000339037 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 RS1O15537 224 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 WFDC2Q14508 124 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 Q6ZSA8 131 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 ATP6V0E2Q8NHE4 81 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 LINC00479Q96M42 142 aa10.37□□□□□ -0.75
LINC01116-202ENST00000339037 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
LINC01116-202ENST00000339037 TRAV34A0A0B4J273 112 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 A0A1W2PRE2 83 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 PGPEP1LA6NFU8 196 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
LINC01116-202ENST00000339037 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
LINC01116-202ENST00000339037 UBE2G2P60604 165 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 ZNF506Q5JVG8 444 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 CLRN3Q8NCR9 226 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 PLA2G2DQ9UNK4 145 aa10.36□□□□□ -0.75
LINC01116-202ENST00000339037 FGF8P55075 233 aaPredicted RBP10.35□□□□□ -0.75
LINC01116-202ENST00000339037 Q8N3U1 123 aa10.35□□□□□ -0.75
LINC01116-202ENST00000339037 ARL2-SNX15V9GYD0 113 aa10.35□□□□□ -0.75
LINC01116-202ENST00000339037 UBR4Q5T4S7 5183 aa10.34□□□□□ -0.75
LINC01116-202ENST00000339037 TRAV8-3A0A0A6YYJ7 113 aa10.34□□□□□ -0.75
LINC01116-202ENST00000339037 LECT2O14960 151 aa10.34□□□□□ -0.75
LINC01116-202ENST00000339037 SAPCD1Q5SSQ6 148 aa10.34□□□□□ -0.75
LINC01116-202ENST00000339037 Q86TA4 180 aa10.34□□□□□ -0.75
LINC01116-202ENST00000339037 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
LINC01116-202ENST00000339037 IGKV3D-20A0A0C4DH25 116 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
LINC01116-202ENST00000339037 PEX7O00628 323 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 ARPC5O15511 151 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 IFNA7P01567 189 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
LINC01116-202ENST00000339037 PTH2Q96A98 100 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms