RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 NSD1Q96L73 2696 aaPredicted RBP12.01□□□□□ -0.49
HPS1-202ENST00000338546 SORL1Q92673 2214 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 TRGV11A0A075B6L2 103 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 CD7P09564 240 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 NSUN5P1Q3KNT7 163 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 DPH3P1Q9H4G8 78 aa12.01□□□□□ -0.49
HPS1-202ENST00000338546 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
HPS1-202ENST00000338546 IGHV3-16A0A0C4DH30 117 aa12□□□□□ -0.49
HPS1-202ENST00000338546 OR11H12B2RN74 326 aa12□□□□□ -0.49
HPS1-202ENST00000338546 SAP30O75446 220 aa12□□□□□ -0.49
HPS1-202ENST00000338546 KRTAP10-3P60369 221 aa12□□□□□ -0.49
HPS1-202ENST00000338546 AP1S3Q96PC3 154 aa12□□□□□ -0.49
HPS1-202ENST00000338546 LINC00467Q9BRT7 94 aa12□□□□□ -0.49
HPS1-202ENST00000338546 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
HPS1-202ENST00000338546 CUBNO60494 3623 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 LINC01546A6NGU7 62 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 M0R381 172 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 CRXO43186 299 aaPredicted RBP11.99□□□□□ -0.49
HPS1-202ENST00000338546 ODF3L2Q3SX64 289 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
HPS1-202ENST00000338546 TIMM8BQ9Y5J9 83 aaPredicted RBP11.99□□□□□ -0.49
HPS1-202ENST00000338546 AGRNO00468 2067 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 TNFRSF6BO95407 300 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 PPP1R17O96001 155 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 NPYP01303 97 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
HPS1-202ENST00000338546 HIVEP1P15822 2718 aa11.98□□□□□ -0.49
HPS1-202ENST00000338546 FN1P02751 2386 aaKnown RBP11.98□□□□□ -0.49
HPS1-202ENST00000338546 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
HPS1-202ENST00000338546 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
HPS1-202ENST00000338546 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
HPS1-202ENST00000338546 IFI27P40305 119 aaPredicted RBP11.97□□□□□ -0.49
HPS1-202ENST00000338546 CDPF1Q6NVV7 123 aa11.97□□□□□ -0.49
HPS1-202ENST00000338546 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
HPS1-202ENST00000338546 SMKR1H3BMG3 65 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 LEPROTL1O95214 131 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 C3orf79P0CE67 100 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 KRTDAPP60985 99 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 BEAN1Q3B7T3 259 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 Q8N1Y9 231 aa11.96□□□□□ -0.49
HPS1-202ENST00000338546 PCP4L1A6NKN8 68 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 NCR2O95944 276 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 PF4P02776 101 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.5
HPS1-202ENST00000338546 PKIAP61925 76 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 PIK3CD-AS1Q5SR53 167 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 STHQ8IWL8 128 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 LINC00482Q8N8I6 264 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 WNK1Q9H4A3 2382 aa11.96□□□□□ -0.5
HPS1-202ENST00000338546 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
HPS1-202ENST00000338546 INSP01308 110 aa11.95□□□□□ -0.5
HPS1-202ENST00000338546 SMIM17P0DL12 118 aa11.95□□□□□ -0.5
HPS1-202ENST00000338546 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
HPS1-202ENST00000338546 TRPT1Q86TN4 253 aaKnown RBP11.95□□□□□ -0.5
HPS1-202ENST00000338546 NRACQ8N912 160 aa11.95□□□□□ -0.5
HPS1-202ENST00000338546 PTH2Q96A98 100 aa11.95□□□□□ -0.5
HPS1-202ENST00000338546 LOC389332A0A1B0GUA5 103 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 INSL3P51460 131 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 NUTF2P61970 127 aaKnown RBP11.94□□□□□ -0.5
HPS1-202ENST00000338546 ZNF124Q15973 351 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
HPS1-202ENST00000338546 Q8N8P6 123 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 KIF25-AS1Q9Y6Z4 181 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
HPS1-202ENST00000338546 CBY3A6NI87 242 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 Q8N976 141 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 MUC4Q99102 2169 aa11.93□□□□□ -0.5
HPS1-202ENST00000338546 K7EMI3 77 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 RBMY1A1P0DJD3 496 aaKnown RBP11.92□□□□□ -0.5
HPS1-202ENST00000338546 RBMY1CP0DJD4 496 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 FXYD7P58549 80 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 RBMY1FQ15415 496 aaKnown RBP11.92□□□□□ -0.5
HPS1-202ENST00000338546 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 HBDP02042 147 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 LINC00315P59091 139 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 LURAP1LQ8IV03 231 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 CITED1Q99966 193 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
HPS1-202ENST00000338546 IGLV2-18A0A075B6J9 118 aa11.91□□□□□ -0.5
HPS1-202ENST00000338546 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
HPS1-202ENST00000338546 PET117Q6UWS5 81 aa11.91□□□□□ -0.5
HPS1-202ENST00000338546 SPATA12Q7Z6I5 190 aa11.91□□□□□ -0.5
HPS1-202ENST00000338546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.91□□□□□ -0.5
HPS1-202ENST00000338546 C20orf202A1L168 122 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.5
HPS1-202ENST00000338546 GATA1P15976 413 aaPredicted RBP11.9□□□□□ -0.5
HPS1-202ENST00000338546 RPL32P62910 135 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms