RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 DPF1Q92782 380 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
UBA1-201ENST00000335972 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
UBA1-201ENST00000335972 RASL10AQ92737 203 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 ZNF469Q96JG9 3925 aaPredicted RBP11.17□□□□□ -0.62
UBA1-201ENST00000335972 B4DSR2 109 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 K7ERJ3 54 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 OVOL1O14753 267 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 PSMG4Q5JS54 123 aa11.17□□□□□ -0.62
UBA1-201ENST00000335972 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
UBA1-201ENST00000335972 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
UBA1-201ENST00000335972 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
UBA1-201ENST00000335972 EMP1P54849 157 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 ADAMTSL5Q6ZMM2 481 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 MAPKAPK5-AS1Q8N8E1 139 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 IGLV1-40P01703 118 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
UBA1-201ENST00000335972 SYNJ2BPP57105 145 aa11.15□□□□□ -0.62
UBA1-201ENST00000335972 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
UBA1-201ENST00000335972 DPM2O94777 84 aa11.15□□□□□ -0.62
UBA1-201ENST00000335972 HTN1P15515 57 aa11.15□□□□□ -0.62
UBA1-201ENST00000335972 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.63
UBA1-201ENST00000335972 F5H697 171 aa11.15□□□□□ -0.63
UBA1-201ENST00000335972 NDUFS8O00217 210 aa11.15□□□□□ -0.63
UBA1-201ENST00000335972 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.63
UBA1-201ENST00000335972 BEX4Q9NWD9 120 aaPredicted RBP11.15□□□□□ -0.63
UBA1-201ENST00000335972 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 CD7P09564 240 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 FXYD2P54710 66 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 KRTAP10-9P60411 292 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 SUMO2P61956 95 aaKnown RBP11.14□□□□□ -0.63
UBA1-201ENST00000335972 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 AP1S3Q96PC3 154 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 CHD6Q8TD26 2715 aa11.14□□□□□ -0.63
UBA1-201ENST00000335972 DUX3Q96PT4 197 aa11.13□□□□□ -0.63
UBA1-201ENST00000335972 DPH3P1Q9H4G8 78 aa11.13□□□□□ -0.63
UBA1-201ENST00000335972 PRRC2AP48634 2157 aaKnown RBP11.13□□□□□ -0.63
UBA1-201ENST00000335972 PRM2P04554 102 aa11.13□□□□□ -0.63
UBA1-201ENST00000335972 HSD52Q0P140 79 aa11.13□□□□□ -0.63
UBA1-201ENST00000335972 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.634e-8■■■■□ 22.3
UBA1-201ENST00000335972 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.12□□□□□ -0.63
UBA1-201ENST00000335972 SPINK13Q1W4C9 94 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 FAM159AQ6UWV7 190 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 CHAC1Q9BUX1 264 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
UBA1-201ENST00000335972 TRBV25-1A0A075B6N4 114 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 ATP5LO75964 103 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 CFHR3Q02985 330 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 OR9G4Q8NGQ1 327 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
UBA1-201ENST00000335972 MDFICQ9P1T7 246 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 ACANP16112 2415 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 SEC11AP67812 179 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 A6NDN8 102 aa11.11□□□□□ -0.63
UBA1-201ENST00000335972 PSMB8P28062 276 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 CDKN1BP46527 198 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 C2orf66Q6UXQ4 117 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
UBA1-201ENST00000335972 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
UBA1-201ENST00000335972 IGHV4OR15-8A0A075B7B6 117 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 A0A087WW49 117 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 A0A087WX48 190 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 H3BUA1 57 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
UBA1-201ENST00000335972 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
UBA1-201ENST00000335972 VPS25Q9BRG1 176 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 NACAE9PAV3 2078 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 MTORP42345 2549 aa11.09□□□□□ -0.63
UBA1-201ENST00000335972 LINC01356Q8N9X3 169 aa11.08□□□□□ -0.63
UBA1-201ENST00000335972 CST9LQ9H4G1 147 aa11.08□□□□□ -0.63
UBA1-201ENST00000335972 ZNF256Q9Y2P7 627 aaPredicted RBP11.08□□□□□ -0.63
UBA1-201ENST00000335972 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.63
UBA1-201ENST00000335972 C9orf118A6NHY6 69 aa11.08□□□□□ -0.64
UBA1-201ENST00000335972 ATP6V0BQ99437 205 aa11.08□□□□□ -0.64
UBA1-201ENST00000335972 APCP25054 2843 aa11.08□□□□□ -0.64
UBA1-201ENST00000335972 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
UBA1-201ENST00000335972 JMJD1CQ15652 2540 aa11.08□□□□□ -0.64
UBA1-201ENST00000335972 ID1P41134 155 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 C2CD3Q4AC94 2353 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
UBA1-201ENST00000335972 SAP30O75446 220 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 SUMO4Q6EEV6 95 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 H3BRM9 83 aa11.07□□□□□ -0.64
UBA1-201ENST00000335972 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms